Gene
| Gene Model ID | pfu_aug2.0_1046.1_21364 |
|---|---|
| Locus | scaffold1046.1 : 9453 ... 13655 : - |
| To GenomeBrowser | scaffold1046.1:9453..13655 |
| Genes list of scaffold | scaffold1046.1 |
| Synonym | pfu_aug1.0_174.1_43564 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1046.1_21364.t1 | 2 | 1 | Ig_3 | 52 | 139 | 1.6e-14 | 54.0 | 7.8e-10 | 1.7e-06 | 28.4 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 1 | V-set | 52 | 151 | 6.3e-08 | 32.5 | 3.8e-06 | 0.0081 | 16.0 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 1 | Ig_2 | 53 | 143 | 3.4e-21 | 75.1 | 9.2e-13 | 1.9e-09 | 37.4 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 1 | I-set | 55 | 153 | 3.4e-24 | 84.5 | 2.6e-12 | 5.6e-09 | 35.7 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 1 | ig | 61 | 138 | 1.3e-11 | 44.4 | 5.0e-09 | 1.1e-05 | 25.5 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 2 | Ig_3 | 188 | 251 | 1.6e-14 | 54.0 | 6.3e-08 | 0.00013 | 22.3 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 2 | I-set | 189 | 262 | 3.4e-24 | 84.5 | 1.9e-15 | 3.9e-12 | 45.8 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 2 | Ig_2 | 189 | 257 | 3.4e-21 | 75.1 | 3.3e-12 | 6.9e-09 | 35.7 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 2 | ig | 190 | 248 | 1.3e-11 | 44.4 | 1.7e-05 | 0.036 | 14.2 |
| pfu_aug2.0_1046.1_21364.t1 | 2 | 2 | V-set | 211 | 252 | 6.3e-08 | 32.5 | 1.6e-05 | 0.034 | 14.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1046.1_21364.t1 | gi|676494030|ref|XP_009066429.1| | hypothetical protein LOTGIDRAFT_108898, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1046.1_21364.t1 | gi|241705996|ref|XP_002411991.1| | IG-like C2-type domain-containing protein, putative [Ixodes scapularis] | 8.0e-39 |
| pfu_aug2.0_1046.1_21364.t1 | gi|339241873|ref|XP_003376862.1| | putative immunoglobulin I-set domain protein [Trichinella spiralis] | 2.0e-32 |
| pfu_aug2.0_1046.1_21364.t1 | gi|242020475|ref|XP_002430679.1| | Neural/ectodermal development factor IMP-L2 precursor, putative [Pediculus humanus corporis] | 3.0e-31 |
| pfu_aug2.0_1046.1_21364.t1 | gi|391338662|ref|XP_003743675.1| | PREDICTED: protein sidekick-like [Metaseiulus occidentalis] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_1046.1_21364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1046.1_21364.t1 atgggcagtttacctcagttattttgtgctatcgtgactctgtcattgagcttttcattttgtctcggtcgattgtggga tcccagctttggattatcaaagagaggaggagttgcacgtgggtcacttttctttaagaagaacgagcttttaccttcaa taacggtagcatctcgccaccaaagcatcgtattaacgtgtcaggcaggcggtaaatcacctacgatacattggttaaag gatgatcagagaattcaacagggagacgacagagattatctgaatgatgagccagcctacgaggaaccgctgaacgaggg ggaaggatcgtccctagggctcagctttacaaaatctaaattatttttggactgtgtgacaccggaacaagccggggaat acacgtgtgtcgctgaaacaacaacagaaagaatagctcagaccacggaacttgttgttggagaagattatgatggcact ggcaattgtttagcaaagagatcattaagaggtcgccgtgagccggctagaatatatctgtggacaagcaatcgcctgga agtacaaggaatggccgtacaattgtactgccgagtggaaggtttccctgcccctactttatcctggtttgacaataacg gagaagaaattttaccaagcaatgataactatcagctcttggataatggagacctgctcataaagcacatttcatggtcc aacatggggagatatcgatgtgagacgactaatggactcggcacggactcggtcaccaccttcctttacccaacgagaaa cacaagaggccgaccttcttag |
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Protein
| Protein ID | pfu_aug2.0_1046.1_21364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1046.1_21364.t1 MGSLPQLFCAIVTLSLSFSFCLGRLWDPSFGLSKRGGVARGSLFFKKNELLPSITVASRHQSIVLTCQAGGKSPTIHWLK DDQRIQQGDDRDYLNDEPAYEEPLNEGEGSSLGLSFTKSKLFLDCVTPEQAGEYTCVAETTTERIAQTTELVVGEDYDGT GNCLAKRSLRGRREPARIYLWTSNRLEVQGMAVQLYCRVEGFPAPTLSWFDNNGEEILPSNDNYQLLDNGDLLIKHISWS NMGRYRCETTNGLGTDSVTTFLYPTRNTRGRPS |
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