Gene
| Gene Model ID | pfu_aug2.0_1046.1_21366 |
|---|---|
| Locus | scaffold1046.1 : 49619 ... 61635 : - |
| To GenomeBrowser | scaffold1046.1:49619..61635 |
| Genes list of scaffold | scaffold1046.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1046.1_21366.t1 | 1 | 1 | BPL_LplA_LipB | 2 | 83 | 2.2e-10 | 40.5 | 5.2e-14 | 3.8e-10 | 39.8 |
| pfu_aug2.0_1046.1_21366.t1 | 1 | 1 | BPL_C | 149 | 196 | 4.0e-12 | 45.6 | 1.0e-15 | 7.4e-12 | 44.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1046.1_21366.t1 | gi|260835178|ref|XP_002612586.1| | hypothetical protein BRAFLDRAFT_219676 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1046.1_21366.t1 | gi|676429712|ref|XP_009045690.1| | hypothetical protein LOTGIDRAFT_171251 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1046.1_21366.t1 | gi|597766974|ref|XP_007247352.1| | PREDICTED: biotin--protein ligase isoform X2 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1046.1_21366.t1 | gi|597766972|ref|XP_007247351.1| | PREDICTED: biotin--protein ligase isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1046.1_21366.t1 | gi|632980397|ref|XP_007907011.1| | PREDICTED: biotin--protein ligase [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1046.1_21366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1046.1_21366.t1 atgttctctctgcacgtgaactttgatgttgacagtaatctgggacggacagcctcgttcctgcagcacattacgtcact agccgtggtagagggcgtcaggtctatgcctggctatgaggaaatagatttgcgacttaagtggccaaacgacttatact acagtgataagatgaagtttggtggcgtcatagtgaaatctaccatcatggataagcagtgccatgcaattataggttgt ggtttcaatgtctccaactcgaatcccacaatttgcatcaatgaccttataaggcgccacaataaagaaaatggtgacac tttacctgaagtcaccaaggagcaactcatagccagaacggtaacggtcatggaggaacttatagatgagtttcagaggg aggggcatgaaaagttttgcagtgcctactacaagagatggctacatagtggaagtaaagtccgacttgaaagtgaaggt aacatagaggtgacaatacagggtttggatacctacggctatctgttggtcagtaagagtgacggaaccatggtcagtgt ccagccggacggcaatagcttcgatataatgagaaacctaattacattaaaggctaatccatga |
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Protein
| Protein ID | pfu_aug2.0_1046.1_21366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1046.1_21366.t1 MFSLHVNFDVDSNLGRTASFLQHITSLAVVEGVRSMPGYEEIDLRLKWPNDLYYSDKMKFGGVIVKSTIMDKQCHAIIGC GFNVSNSNPTICINDLIRRHNKENGDTLPEVTKEQLIARTVTVMEELIDEFQREGHEKFCSAYYKRWLHSGSKVRLESEG NIEVTIQGLDTYGYLLVSKSDGTMVSVQPDGNSFDIMRNLITLKANP |
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