Gene
| Gene Model ID | pfu_aug2.0_105.1_16921 |
|---|---|
| Locus | scaffold105.1 : 110072 ... 113012 : - |
| To GenomeBrowser | scaffold105.1:110072..113012 |
| Genes list of scaffold | scaffold105.1 |
| Synonym | pfu_aug1.0_75331.1_13169 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA_19 | 5 | 36 | 9.7e-10 | 38.0 | 5.5e-06 | 0.0019 | 17.8 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA_17 | 5 | 38 | 4.7e-09 | 37.1 | 3.8e-05 | 0.013 | 16.2 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA_10 | 5 | 45 | 7.3e-08 | 32.1 | 4.7e-05 | 0.017 | 14.6 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA_33 | 5 | 26 | 2.1e-07 | 30.8 | 0.00011 | 0.039 | 13.8 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 1 | MobB | 5 | 36 | 6.5e-07 | 29.1 | 0.00024 | 0.086 | 12.5 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | KTI12 | 5 | 38 | 7.8e-06 | 25.2 | 0.0004 | 0.14 | 11.3 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | ATP_bind_1 | 6 | 88 | 0.0 | 398.2 | 8.7e-37 | 3.1e-34 | 118.5 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | ArgK | 6 | 41 | 1.6e-08 | 33.6 | 1.9e-05 | 0.0067 | 15.2 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA | 6 | 25 | 5.8e-06 | 26.5 | 0.00055 | 0.2 | 11.8 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 1 | AAA_31 | 10 | 61 | 1.2e-06 | 28.5 | 0.0003 | 0.11 | 12.4 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 1 | CbiA | 11 | 40 | 3.5e-06 | 26.5 | 0.00051 | 0.18 | 11.1 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA_19 | 120 | 151 | 9.7e-10 | 38.0 | 5.0e-06 | 0.0018 | 18.0 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA_17 | 120 | 154 | 4.7e-09 | 37.1 | 1.0e-05 | 0.0036 | 18.1 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA_10 | 120 | 160 | 7.3e-08 | 32.1 | 2.2e-05 | 0.0079 | 15.6 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA_33 | 120 | 154 | 2.1e-07 | 30.8 | 5.5e-05 | 0.019 | 14.8 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 2 | MobB | 120 | 151 | 6.5e-07 | 29.1 | 0.00024 | 0.086 | 12.5 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | KTI12 | 120 | 153 | 7.8e-06 | 25.2 | 0.0004 | 0.14 | 11.3 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | ATP_bind_1 | 121 | 369 | 0.0 | 398.2 | 0.0 | 0.0 | 277.7 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | ArgK | 121 | 156 | 1.6e-08 | 33.6 | 1.0e-05 | 0.0035 | 16.1 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA | 121 | 140 | 5.8e-06 | 26.5 | 0.00053 | 0.19 | 11.9 |
| pfu_aug2.0_105.1_16921.t1 | 2 | 2 | AAA_31 | 125 | 177 | 1.2e-06 | 28.5 | 0.00028 | 0.097 | 12.5 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 2 | CbiA | 126 | 155 | 3.5e-06 | 26.5 | 0.00031 | 0.11 | 11.8 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 3 | MobB | 234 | 271 | 6.5e-07 | 29.1 | 3.7 | 1300.0 | -1.1 |
| pfu_aug2.0_105.1_16921.t1 | 3 | 3 | CbiA | 356 | 391 | 3.5e-06 | 26.5 | 4.1 | 1500.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_105.1_16921.t1 | gi|524897525|ref|XP_005105223.1| | PREDICTED: GPN-loop GTPase 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_105.1_16921.t1 | gi|72035930|ref|XP_794415.1| | PREDICTED: GPN-loop GTPase 2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_105.1_16921.t1 | gi|719740395|ref|XP_010209394.1| | PREDICTED: GPN-loop GTPase 2 [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_105.1_16921.t1 | gi|529437135|ref|XP_005238331.1| | PREDICTED: GPN-loop GTPase 2 [Falco peregrinus] | 0.0 |
| pfu_aug2.0_105.1_16921.t1 | gi|697504455|ref|XP_009680709.1| | PREDICTED: GPN-loop GTPase 2 isoform X4 [Struthio camelus australis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_105.1_16921.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16921.t1 atgtttggtcaggttgtgataggtcccccagggtcagggaagaccacatactgccatggaatgtctcagttcctgccggc tctcggtcgtgatgtcgccgtggtgaacttagatccagccaatgatatgctaccatacaaatgtgaccttgacatatcaa ccttgataaccttggaagatgtcatgacatccctaaagcttggccctaatggaggactgatatactgtatggaatttcta gagaagaacatggattggttccagactgtaagacccgccagtgaggaaattgatgatccgtgtaaagctacattattgta tataaacctgtatataacgcagggaatgtttggtcaggttgtgataggtcccccaggatcagggaagaccacatactgcc atggaatgtctcagttcctgccggctctcggtcgtgatgtcgccgtggtgaacttagatccagccaatgatatgctacca tacaaatgtgaccttgacatatcaaccttgataaccttggaagatgtcatgacatccctaaagcttggccctaatggagg actgatatactgtatggaatttctagagaagaacatggattggttccagagtgaattacagaagctaagagagaagaaaa agtatttattatttgactttcctggtcaagtggaactgtacacacatcataactgtgtgcggaacattttacgtcagcta cagaagtgggactacaggttagcagccgtacatctcgtagactcacattactgtagcgatcctggcaagtttattgccgt ccttcttacatcattgtctactatgcttcaaatggagttaccacatgtcaacgttttatcaaagtgtgatctgatagaga agtttggaaagcttcagtttaacttggatttttatacggaggttttggaccttaattatcttcttgacaacattcaggat gaacctcacttgaagaaatataaaaagttgaatgctgcacttgttgagttggtgcaggattacagcctggtatcatttgt tccatgctatgtacaggataaggagagcatgtatcgtgtgatgaagcaggtggataaagctaatggctatttatttgggg acgtagaagagaggaatatgacgtcactgatgtcatgtgccgtggaatctgagtttgagtacgagaaaatcaaagacgtc agagaaaagtacatggacacagattctcaagtgataaatgatgtatcagattcagaggatatgtccagctga |
|
Protein
| Protein ID | pfu_aug2.0_105.1_16921.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16921.t1 MFGQVVIGPPGSGKTTYCHGMSQFLPALGRDVAVVNLDPANDMLPYKCDLDISTLITLEDVMTSLKLGPNGGLIYCMEFL EKNMDWFQTVRPASEEIDDPCKATLLYINLYITQGMFGQVVIGPPGSGKTTYCHGMSQFLPALGRDVAVVNLDPANDMLP YKCDLDISTLITLEDVMTSLKLGPNGGLIYCMEFLEKNMDWFQSELQKLREKKKYLLFDFPGQVELYTHHNCVRNILRQL QKWDYRLAAVHLVDSHYCSDPGKFIAVLLTSLSTMLQMELPHVNVLSKCDLIEKFGKLQFNLDFYTEVLDLNYLLDNIQD EPHLKKYKKLNAALVELVQDYSLVSFVPCYVQDKESMYRVMKQVDKANGYLFGDVEERNMTSLMSCAVESEFEYEKIKDV REKYMDTDSQVINDVSDSEDMSS |
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