Gene
| Gene Model ID | pfu_aug2.0_105.1_16922 |
|---|---|
| Locus | scaffold105.1 : 114033 ... 146152 : - |
| To GenomeBrowser | scaffold105.1:114033..146152 |
| Genes list of scaffold | scaffold105.1 |
| Synonym | pfu_aug1.0_3393.1_23296 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| aldehyde mitochondrial isoform x1 | GO:0004029 GO:0044710 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_105.1_16922.t1 | 3 | 1 | Aldedh | 59 | 88 | 0.0 | 486.0 | 0.00024 | 0.89 | 7.8 |
| pfu_aug2.0_105.1_16922.t1 | 3 | 2 | Aldedh | 136 | 426 | 0.0 | 486.0 | 0.0 | 0.0 | 370.8 |
| pfu_aug2.0_105.1_16922.t1 | 3 | 3 | Aldedh | 426 | 517 | 0.0 | 486.0 | 5.6e-34 | 2.1e-30 | 105.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_105.1_16922.t1 | gi|676439202|ref|XP_009048780.1| | hypothetical protein LOTGIDRAFT_177987 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_105.1_16922.t1 | gi|617551347|ref|XP_007529015.1| | PREDICTED: aldehyde dehydrogenase, mitochondrial isoform X1 [Erinaceus europaeus] | 0.0 |
| pfu_aug2.0_105.1_16922.t1 | gi|594057729|ref|XP_006053036.1| | PREDICTED: aldehyde dehydrogenase, mitochondrial isoform X1 [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_105.1_16922.t1 | gi|348554353|ref|XP_003462990.1| | PREDICTED: aldehyde dehydrogenase, mitochondrial isoform 1 [Cavia porcellus] | 0.0 |
| pfu_aug2.0_105.1_16922.t1 | gi|115496214|ref|NP_001068835.1| | aldehyde dehydrogenase, mitochondrial precursor [Bos taurus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_105.1_16922.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16922.t1 atgggtccgcgtggtctacagatttatttaacagtaaataatcgcaaaaacgacgagctgagtacacagtttaatagcaa gcctgtatggggacaggtgcgctgcatgtcagcgatcccagcacctcaggtggatccagaagtcaaatacaccaaggctt ttattaacaatgaatgggtgaattcaaagagtggtaaaacatttaagacagtaaatccttccactggaggtaccatctgt gaagtggcagaaggagacaagactctgtacacgtatccagacaatttcagagcttttaaagccctcattgctgcccagta cagcggtgccgatgtcaaagttccaagcaacttcaagtttggagcgacaaataaagaggctgatttccttgcaaaattcc cgttaggaaaggctgatgtggacattgcagtagaggctgctaaggaagcctttagactgggatcaccatggcgacgtatg gatgcagctcagaggggcgtgttactgaaccgactggcagatctcatagagagagacaaagtctatctgtcttcacttga aacactggacaacggaaaaccatatcatgtggcctttacagctgacttggagctggtcattaagtgttacaggtactacg caggatgggccgacaaaaatcatggaaaaaccatacctatctgtggtgatttctttacctacaccagacatgaacctgtg ggaatctgtggacagattatcccttggaacttccccctcctaatgcaggcatggaagctaggtccagcattagccatggg taacacagtggttatgaaagtggcagagcaaacaccactaacagctctgtatgtggcacatctagccactgaggcagggt tccctcccggggtcatcaacataatccctgggtacggtcctactgcaggtgcagccattgctaagcacatggatgtagac aaagtggcatttactggatccactgaggtaggccacctagtggcagaaatggctgctaaatccaacctcaaacgggtcac gttggaactcggtggcaagagtccaagcattgtccttagtgatgcggatttggataaggcagtagagacggtccattttg gcctattctttaaccaaggacagtgttgttgtgccggctccagagtttttgtcgaggagaagatttacgatgaatttgtt gaacgcagtattgctagagctaaaaagaggagtgtggggaatccatacgactcaacatatgaacaaggaccacagatatt tggtccagtgatgcctattatgaagtttaagaacatggacgagttaatagagagaagccacaagacaatctatggactgg ccgctgccgtacacactcaggacctcgacaaagctatatatctgtctaacagtctgcgggcaggaactgtatgggtaaat tgctttgatgtgtttgatgctggagcaccgttcggtggatataaaatgtcaggtagcggacgtgaactcggagaatacgg cctggataattacacagaagtcaaatgtgtgaccatcaaaatccctcagaagaactcttag |
|
Protein
| Protein ID | pfu_aug2.0_105.1_16922.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16922.t1 MGPRGLQIYLTVNNRKNDELSTQFNSKPVWGQVRCMSAIPAPQVDPEVKYTKAFINNEWVNSKSGKTFKTVNPSTGGTIC EVAEGDKTLYTYPDNFRAFKALIAAQYSGADVKVPSNFKFGATNKEADFLAKFPLGKADVDIAVEAAKEAFRLGSPWRRM DAAQRGVLLNRLADLIERDKVYLSSLETLDNGKPYHVAFTADLELVIKCYRYYAGWADKNHGKTIPICGDFFTYTRHEPV GICGQIIPWNFPLLMQAWKLGPALAMGNTVVMKVAEQTPLTALYVAHLATEAGFPPGVINIIPGYGPTAGAAIAKHMDVD KVAFTGSTEVGHLVAEMAAKSNLKRVTLELGGKSPSIVLSDADLDKAVETVHFGLFFNQGQCCCAGSRVFVEEKIYDEFV ERSIARAKKRSVGNPYDSTYEQGPQIFGPVMPIMKFKNMDELIERSHKTIYGLAAAVHTQDLDKAIYLSNSLRAGTVWVN CFDVFDAGAPFGGYKMSGSGRELGEYGLDNYTEVKCVTIKIPQKNS |
|