Gene
| Gene Model ID | pfu_aug2.0_105.1_16923 |
|---|---|
| Locus | scaffold105.1 : 146253 ... 174041 : + |
| To GenomeBrowser | scaffold105.1:146253..174041 |
| Genes list of scaffold | scaffold105.1 |
| Synonym | pfu_aug1.0_1792.1_37116 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_105.1_16923.t1 | 4 | 1 | AMP-binding | 99 | 308 | 0.0 | 307.7 | 2.24208e-44 | 1.7e-40 | 138.7 |
| pfu_aug2.0_105.1_16923.t1 | 4 | 2 | AMP-binding | 356 | 400 | 0.0 | 307.7 | 1.3e-05 | 0.098 | 11.0 |
| pfu_aug2.0_105.1_16923.t1 | 4 | 3 | AMP-binding | 408 | 456 | 0.0 | 307.7 | 1.6e-07 | 0.0012 | 17.3 |
| pfu_aug2.0_105.1_16923.t1 | 4 | 4 | AMP-binding | 471 | 723 | 0.0 | 307.7 | 7.00649e-45 | 4.80001e-41 | 140.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_105.1_16923.t1 | gi|554856838|ref|XP_005938585.1| | PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X1 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_105.1_16923.t1 | gi|554856840|ref|XP_005938586.1| | PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X2 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_105.1_16923.t1 | gi|573904508|ref|XP_006639976.1| | PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_105.1_16923.t1 | gi|556985288|ref|XP_005998401.1| | PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_105.1_16923.t1 | gi|548375743|ref|XP_005733294.1| | PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_105.1_16923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16923.t1 atggcgagcgcggacgtggtcacgcccccacaacaggatacatcatctgaggacaacgcgtcaaaaatgcaaactgaaaa tggaggggctaagagtcaacaaaaggagtcaaataataacgcctctcgtccaggtcaggggtcaaggacttccgccttaa tacctccagacatagacagtgtggctccatctcaggaatttgtgacaattggcagagattctgccgtcagacttagaacg caggacaccggtcccctagcggaaaaacctctcaccataccctctgttttctactccactgtacaacgtgtacctgataa cccagctgtagctgttaagagaggaggagtgtggaaaacatggacgtacagagaatactgggatatcgttataaagacag caaagagtttcataaagcttggtttggagccttaccatggtgttggtataattggtttcaattcaccagaatggttcttc tcagatctgggtgctatatttgccggtggttttgctgttggtatatatacgacaaattctcccgaggcttgtgaatatgt agcatcaaactgcgaagctaatatcatcgtggtggagaacaacgtacagttaaagaaaatactccaagtttgggataagc tgccccaccttaaagccgtcgtacagtacaccggagaagtggccgagaaaaacgacagagtctacaattcaggtactact ggaaatcctaaaggcgttatgctcagtcatgataatctgacatggacggccaggcgctgcagtagtatgtttggtttgat gtcgggggaggaggtggtcgtcagttacctccccctgagtcacgtagcggcacagatgattgacatgcatataacaatga gggtgggagctactgtgtactttgctcagcctgatgcactcaaggtttgtggtgatatagataggacgaacaaggagata gggaaggaatcattagcaagtttaggtcagctcagtgtggtgttacagacagcaggtttaggtcagctcagtgtgctgac ctggacctcgagcaccgtgggtaaacacatgaattgggaattcggaaaggagatctccctgagttatctgcccttgagtc atattgcggctcagctgttagatttgattattcctatgacatggggaggaatgacttattttgctatgccagatgctatg aagctgacatggacggccaggcgctgcagtagtatgtttggtttgatgtcgggggaggaggtggtcgtgagttacctccc cctgagccacgtagcggcacagatgattgacatgcatatcacaatgagggtgggagctactgtgtactttgctcagcctg atgcactcaagctgacctggacctccagcaccatgggtaaacacatgaattgggaatacggaaaggagatctccctgagt tatctgcccttgagtcatattgcggctcagcttttagatttgattattcctatgacgtggggaggaatgacttattttgc tatgccagatgctatgaagggttccttgctaacaacactccaggaagtgcggccaacaggatttttaggtgtgcctcggg tatgggagaagtttcaggaggggatcaaggagaaggcccgacagagaggtggtatggccagacggatgggtgcctgggcc cgtaaagtgggcttagaggctagcatagcacaaatgaacaaacagtcaacaccatttggctactccctagctaagatgtt ggtatttaatcgtctacgtaagacatttgggctcgatcgctgtaagacttgtgtatcaggagcggcccccatcaccaagg aaacactggagtttttctacagccttgatatacagctacaagaggtgtacggcatgagtgaatcatcaggtagacaggga gatttccgtatgtgtagtgtcggtaaggaattcccaggagcacagactaaatttgctgatgtcgatgaggaaggaaatgg ggagatctgcatgaatggtcgccatgtatttatgggttaccttggtgatgaagagaagactaaagaagcttttgacaacg aattttggttacggtctggtgacctcggcaagagagacaaagatggattcttgttcatcacgggaagaaagaaagggttg attataacagccagcggagagaacattgcccctgtacctatagaggataacatgaaggaatgtttacagtgtatcagtaa cacgtgtactgtttgttttacagagttaattataacagccagcggagagaacattgcccctgtacctatagaggataaat caaggaaagtttaccttgtatcagtaacacatgtggaggtgaacccagacacaggtgaccccatggacgacctgatgcag agtgccatagactggtgtaaggagcagggtagtcagtctaccaaggtgtcccagatactggacaacaaagactcggtggt tctcaaggccatacagaccggaatagacaaggcaaacgagaaggctgtgtcccgggcggcaaaaatccagaaatggtcac tacttcccagggatttctcaatacctggaggcgagcttggtcccacattgaagctaagaagaccaatattaaccgatgga tcaattgcatttggttaa |
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Protein
| Protein ID | pfu_aug2.0_105.1_16923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16923.t1 MASADVVTPPQQDTSSEDNASKMQTENGGAKSQQKESNNNASRPGQGSRTSALIPPDIDSVAPSQEFVTIGRDSAVRLRT QDTGPLAEKPLTIPSVFYSTVQRVPDNPAVAVKRGGVWKTWTYREYWDIVIKTAKSFIKLGLEPYHGVGIIGFNSPEWFF SDLGAIFAGGFAVGIYTTNSPEACEYVASNCEANIIVVENNVQLKKILQVWDKLPHLKAVVQYTGEVAEKNDRVYNSGTT GNPKGVMLSHDNLTWTARRCSSMFGLMSGEEVVVSYLPLSHVAAQMIDMHITMRVGATVYFAQPDALKVCGDIDRTNKEI GKESLASLGQLSVVLQTAGLGQLSVLTWTSSTVGKHMNWEFGKEISLSYLPLSHIAAQLLDLIIPMTWGGMTYFAMPDAM KLTWTARRCSSMFGLMSGEEVVVSYLPLSHVAAQMIDMHITMRVGATVYFAQPDALKLTWTSSTMGKHMNWEYGKEISLS YLPLSHIAAQLLDLIIPMTWGGMTYFAMPDAMKGSLLTTLQEVRPTGFLGVPRVWEKFQEGIKEKARQRGGMARRMGAWA RKVGLEASIAQMNKQSTPFGYSLAKMLVFNRLRKTFGLDRCKTCVSGAAPITKETLEFFYSLDIQLQEVYGMSESSGRQG DFRMCSVGKEFPGAQTKFADVDEEGNGEICMNGRHVFMGYLGDEEKTKEAFDNEFWLRSGDLGKRDKDGFLFITGRKKGL IITASGENIAPVPIEDNMKECLQCISNTCTVCFTELIITASGENIAPVPIEDKSRKVYLVSVTHVEVNPDTGDPMDDLMQ SAIDWCKEQGSQSTKVSQILDNKDSVVLKAIQTGIDKANEKAVSRAAKIQKWSLLPRDFSIPGGELGPTLKLRRPILTDG SIAFG |
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