Gene
| Gene Model ID | pfu_aug2.0_105.1_16927 |
|---|---|
| Locus | scaffold105.1 : 319302 ... 327022 : - |
| To GenomeBrowser | scaffold105.1:319302..327022 |
| Genes list of scaffold | scaffold105.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pyroglutamyl-peptidase 1 isoform x2 | GO:0005737 GO:0070011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_105.1_16927.t1 | 2 | 1 | Peptidase_C15 | 5 | 72 | 2.5e-13 | 50.3 | 3.5e-16 | 5.3e-12 | 46.0 |
| pfu_aug2.0_105.1_16927.t1 | 2 | 2 | Peptidase_C15 | 76 | 101 | 2.5e-13 | 50.3 | 0.0078 | 120.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_105.1_16927.t1 | gi|578833357|ref|XP_006722846.1| | PREDICTED: pyroglutamyl-peptidase 1 isoform X4 [Homo sapiens] | 6.0e-34 |
| pfu_aug2.0_105.1_16927.t1 | gi|731492015|ref|XP_010591528.1| | PREDICTED: pyroglutamyl-peptidase 1 isoform X2 [Loxodonta africana] | 2.0e-33 |
| pfu_aug2.0_105.1_16927.t1 | gi|348500981|ref|XP_003438049.1| | PREDICTED: pyroglutamyl-peptidase 1-like [Oreochromis niloticus] | 2.0e-23 |
| pfu_aug2.0_105.1_16927.t1 | gi|634861173|ref|XP_007943663.1| | PREDICTED: pyroglutamyl-peptidase 1 [Orycteropus afer afer] | 4.0e-23 |
| pfu_aug2.0_105.1_16927.t1 | gi|741931429|ref|XP_010804887.1| | PREDICTED: pyroglutamyl-peptidase 1 isoform X2 [Bos taurus] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_105.1_16927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16927.t1 atgacttccaaaaggaaagttttagtcacagggtttggaccatttggcgagcacaaagttaacgctagctgggtagcagt ccaaagattggcagagtttggtgtgaaggatgatgttgaactagtcaccagggagatacctgtagattatgatatggtga aagaaatcatctgttctctctgggaagaagaaaagccagatgttagtattggcttgaaattatagtatctctgtgatttt tcatactatgtacagctgagtaacgatcccacatgttcagcttttatacacgttccccctcttggagccccgtacacagc agatcagctggcccagggtctaaggatagccattatagaaatgctacgacagattcaatga |
|
Protein
| Protein ID | pfu_aug2.0_105.1_16927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16927.t1 MTSKRKVLVTGFGPFGEHKVNASWVAVQRLAEFGVKDDVELVTREIPVDYDMVKEIICSLWEEEKPDVSIGLKLXYLCDF SYYVQLSNDPTCSAFIHVPPLGAPYTADQLAQGLRIAIIEMLRQIQ |
|