Gene
| Gene Model ID | pfu_aug2.0_105.1_16933 |
|---|---|
| Locus | scaffold105.1 : 444222 ... 448102 : - |
| To GenomeBrowser | scaffold105.1:444222..448102 |
| Genes list of scaffold | scaffold105.1 |
| Synonym | pfu_aug1.0_4707.1_23642 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_105.1_16933.t1 | 2 | 1 | RVT_1 | 118 | 210 | 7.0e-06 | 25.5 | 9.1e-09 | 6.8e-05 | 22.3 |
| pfu_aug2.0_105.1_16933.t1 | 2 | 1 | rve | 334 | 346 | 3.4e-06 | 27.1 | 1.3 | 9800.0 | -3.4 |
| pfu_aug2.0_105.1_16933.t1 | 2 | 2 | RVT_1 | 480 | 510 | 7.0e-06 | 25.5 | 0.061 | 450.0 | 0.0 |
| pfu_aug2.0_105.1_16933.t1 | 2 | 2 | rve | 548 | 649 | 3.4e-06 | 27.1 | 1.5e-09 | 1.1e-05 | 25.4 |
Transcript
| Transcript ID | pfu_aug2.0_105.1_16933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16933.t1 atggcctggggagttcatggagctcaaactacctacctattggacccaaatgacatcctctcagatgacatgaaatcgga tttcaggcgattgcataacaaattcgattccgtatttagtacatccctggaagggtacaatggtaatgcaggcccattca aaggaaaagttaacatgggtcccgtccttcccccgcagaggaagggtagtattccacaatattcacgtaatcaattagag gagcttcagcggaaatttaatgaactcgaagagcatggcatatttcgcaagcccgaagatgtcgatgtcaccgttgagta cttaaacccgtctttccttgtaaagaaaggaaatggaacttatcgtttgggaattcgcgtttatactcgatgcgctatgg gaatgcccggatcagagacggccttggaagaacttacctgccgggtactcggagacttgctagaggaaggcatagtaact aaactagctgatgatttatattgcgggggcaacacgccccaggaactccttgaaaattggacaaaagtgctagaagcttt acaaaagtgcaatcttaagctctccgcaactaagaccgtaatcgcgccccgaaccactactacccttggatggatatggg aacaaggaacgctaaaggccaaccctcatcgtattgcagctttatcgttatgcgaaccacctaagactgttaaagcactc cgctcattttcagatgcggttaagcaatctctaaattctagtaagactatacacattccaagaactgatgacactttgtg gatagttaccgatgctgccgttcgaagccctggcatcggtgccacactctacaatacaagaggggacaaaatacttttat ccggatttttcagtgccaaacttaggaagcatcagatctcttggattccttgcgaagtagaggctttagccatagctgtg gctgtaaaacattttagtccgtacattgtccagtcttcaaaaccaacttgcattttaaccgacacaggctcagctattct tccatcagatttctctagcagaagtactcccgattgtatagatcctacttgccaagtatgtcaattcatcaacacaaccg tagactctgttgtccgtaacataacagtgagcgacatattaacaggaaaggtccgactcccattcacaagtcgtgccgca tggatgtcaattcaagcagagtcttcagatctttgtcgcactcgtgctcatctacttcaaggtacacgaccttctcggaa aattaccaacttaccagatgtcaaacgctatcttcgagtagcgacagtcgctcatgatggcttagtcattgtcaaacgct cagaaccgtttcaatcatcaagagaactaattgttattcctcgggaagtactgcatggtatcttaacctcgttgcacata cagcttcagcatcaatccaggaaccaacttaaactcgtcacacagcgctttttctacgcaattgatatggataaagcaat cgacctggtaacgggatcttgtcatcaatgtgcctccattcaaaaagtcccacatatgctcgtcaaagaggacacaggtg atccacccgaggccatcggcacctcattcgcttgcgacatcatgaaacgagagagacaactcttattagtagtccgagaa tgcatcacatcatatacatccgcatgcatcattgaaaatgaacaacatgacactatacgagatgcactgattccgctgtg tatcaatctacggcctttagatggtccaccggcaatcatccgaaccgatccaggaccaggattcattgctctagtgaatg accccctacttaaagactgtagactatcacttgaaatagggagggtcaagaacaaaaacaagaaccctgtagccgaatgc gccatacaagagcttcgtgacgagattctacgccttgatccgaccaatagaacagttaatacagtatctttgtgcttagc actgtctgctgtcaacactagaataagatctaacggtctctctgcaagggaaatgcttacacacagaaatcagtttacca acgcacagatacattttgtacccgtttgcgatcgtgatattatactagacaagcatcaggcctgtttgaagaatcatccg tttagtgaggtattgaaggcacctaaagaaaaacccttcgattga |
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Protein
| Protein ID | pfu_aug2.0_105.1_16933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_105.1_16933.t1 MAWGVHGAQTTYLLDPNDILSDDMKSDFRRLHNKFDSVFSTSLEGYNGNAGPFKGKVNMGPVLPPQRKGSIPQYSRNQLE ELQRKFNELEEHGIFRKPEDVDVTVEYLNPSFLVKKGNGTYRLGIRVYTRCAMGMPGSETALEELTCRVLGDLLEEGIVT KLADDLYCGGNTPQELLENWTKVLEALQKCNLKLSATKTVIAPRTTTTLGWIWEQGTLKANPHRIAALSLCEPPKTVKAL RSFSDAVKQSLNSSKTIHIPRTDDTLWIVTDAAVRSPGIGATLYNTRGDKILLSGFFSAKLRKHQISWIPCEVEALAIAV AVKHFSPYIVQSSKPTCILTDTGSAILPSDFSSRSTPDCIDPTCQVCQFINTTVDSVVRNITVSDILTGKVRLPFTSRAA WMSIQAESSDLCRTRAHLLQGTRPSRKITNLPDVKRYLRVATVAHDGLVIVKRSEPFQSSRELIVIPREVLHGILTSLHI QLQHQSRNQLKLVTQRFFYAIDMDKAIDLVTGSCHQCASIQKVPHMLVKEDTGDPPEAIGTSFACDIMKRERQLLLVVRE CITSYTSACIIENEQHDTIRDALIPLCINLRPLDGPPAIIRTDPGPGFIALVNDPLLKDCRLSLEIGRVKNKNKNPVAEC AIQELRDEILRLDPTNRTVNTVSLCLALSAVNTRIRSNGLSAREMLTHRNQFTNAQIHFVPVCDRDIILDKHQACLKNHP FSEVLKAPKEKPFD |
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