Gene
| Gene Model ID | pfu_aug2.0_1051.1_04789 |
|---|---|
| Locus | scaffold1051.1 : 40166 ... 49111 : + |
| To GenomeBrowser | scaffold1051.1:40166..49111 |
| Genes list of scaffold | scaffold1051.1 |
| Synonym | pfu_aug1.0_1222.1_43943 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translocation associated membrane | GO:0006810 GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1051.1_04789.t1 | 1 | 1 | TRAM_LAG1_CLN8 | 10 | 209 | 2.2e-23 | 82.8 | 1.8e-27 | 2.6e-23 | 82.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1051.1_04789.t1 | gi|676493003|ref|XP_009066105.1| | hypothetical protein LOTGIDRAFT_133925 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1051.1_04789.t1 | gi|524911056|ref|XP_005110399.1| | PREDICTED: translocating chain-associated membrane protein 1-like 1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1051.1_04789.t1 | gi|524911052|ref|XP_005110397.1| | PREDICTED: translocating chain-associated membrane protein 1-like 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1051.1_04789.t1 | gi|524911054|ref|XP_005110398.1| | PREDICTED: translocating chain-associated membrane protein 1-like 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1051.1_04789.t1 | gi|241063661|ref|XP_002408195.1| | translocation associated membrane protein, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1051.1_04789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04789.t1 atgcacctgtctaaagtgaagcacagtaaatttaacgagtcaggacagctaatggcattctatggagcatcagccgtgtg gggaggggacctaatagtacgggaaaatttcctgagtataaatcagctttgggaaggatacccccacaatgagttatcgt ttatgatgaagttttactttatagtacaaatagcatactggctccactgtttccccgagctttatttccagaaaacgaaa aaggatgacatgctgtccagaattcagtatgcagttctttacttggtctttataacagcagcatatgcattaaacttttc ccgcgttgccctcgtcatgattgtattacattactctgtggagtttgtcttccatttagcaagactactgtactttgcag agaaaactgatctagctaacacagggtttatggtattcaatgggctatttgtcctagtgaggttgggaaccatcaccctc tctgtgctcacattttggtatggactggagcagagtaaccagcctagtgtagatagggaagctggaaactttaacacgca aatgatcagaataaactgccttgctgcgatctgtctactacaagcctggatgatgtggaacttcatcaacttccatctac gtagaatgagagagaaaagtgcctccagccgtaaacaactcaaatctccagtcaaaaagaagaaagggctagaacatgga gtatacgcactggatgcattcagtggaaaaacattaaaattatgtggtaattgtcaaatgtcaggatatgtaataagtaa agctttatga |
|
Protein
| Protein ID | pfu_aug2.0_1051.1_04789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04789.t1 MHLSKVKHSKFNESGQLMAFYGASAVWGGDLIVRENFLSINQLWEGYPHNELSFMMKFYFIVQIAYWLHCFPELYFQKTK KDDMLSRIQYAVLYLVFITAAYALNFSRVALVMIVLHYSVEFVFHLARLLYFAEKTDLANTGFMVFNGLFVLVRLGTITL SVLTFWYGLEQSNQPSVDREAGNFNTQMIRINCLAAICLLQAWMMWNFINFHLRRMREKSASSRKQLKSPVKKKKGLEHG VYALDAFSGKTLKLCGNCQMSGYVISKAL |
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