Gene
| Gene Model ID | pfu_aug2.0_1051.1_04794 |
|---|---|
| Locus | scaffold1051.1 : 137115 ... 151215 : - |
| To GenomeBrowser | scaffold1051.1:137115..151215 |
| Genes list of scaffold | scaffold1051.1 |
| Synonym | pfu_aug1.0_1222.1_43947 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1051.1_04794.t1 | 1 | 1 | YTH | 294 | 430 | 0.0 | 171.7 | 0.0 | 0.0 | 171.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1051.1_04794.t1 | gi|524869257|ref|XP_005091424.1| | PREDICTED: YTH domain family protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1051.1_04794.t1 | gi|260813525|ref|XP_002601468.1| | hypothetical protein BRAFLDRAFT_245873 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1051.1_04794.t1 | gi|744537667|ref|XP_010988556.1| | PREDICTED: YTH domain-containing family protein 3 [Camelus dromedarius] | 0.0 |
| pfu_aug2.0_1051.1_04794.t1 | gi|696993033|ref|XP_009563583.1| | PREDICTED: YTH domain-containing family protein 2 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_1051.1_04794.t1 | gi|585202842|ref|XP_006752259.1| | PREDICTED: YTH domain family protein 3-like isoform X2 [Leptonychotes weddellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1051.1_04794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04794.t1 atgtccagtcccggagtgaatgatccttttatgccaagctattacaatcaggcgatgccatttccgtacttgagtcaagg acttaccgatactggtgcatggtctaatggcagtgatcaagcgacaatgctctcttttggcaattacgattacaatagca tttttggtggattcgggtatcctcagtttggatgggcacctgattattctggaagtgattattggaataatggacaagca agaactgatggacgacaggcgtatgattattaccaaaaggacactatgatcccgcaagacccctacgccatgaatggggg agagtttgatgtaagagacccttctggagttaatagtgttgaccaaggtttgaaaggaatgacaatttcggacaaggacg gcggtcagggtgttgttacggatcaaggacatatggatcagaatggggcaccgatgcctcctcagtcgaacggagccccc tcgcaagcaaaaaagacaacttcttgggctgctatcgctagtcagccggcaagacctcagccaaagattcagccgcgatc gatcccccgtgctcccatgaaccccaataagaacatggacattgggacgtgggatcagagaaacaatgccggaggtaagc aaggtggtagtggtggaaatcagcaaggacgttcgtggtctgcgcctcgaagcagatccatgaataactactcgggaaat acgaattcaaaccaaagtgggaacagttcaggaaatgctggtctatctcaaatttcgacatcttcttctggaaactctgc gactaatcatcctgtcttagagaaattgaaatctgcgaatcagtacaatcctcgtgacttcaatctgaatcctcgtggtg caaggttctttattataaagagttactctgaggatgacatccatcgttcaattaaatatagcatttggtgtagtaccgat cacggcaacaagagactggatcaggctttcaaggagcgtgaaggaaaaggaccgatctatttgttctttagcgtgaacgg atccggacatttctgtggaatggcccaaatgatgagtcacttggactacaagaacgacgctggtgtttgggcacaggaca aatggaagggcaaattcgaggtgaaatggatctatgtgaaggacgtacccaattcgcaattgcgacacattcgcttggaa aacaatgagaacaagcctgtcaccaactcacgtgacacccaggaagtccccccagaaaaggggaagctagtgttgaaaat cattcacacgtataagtacgcgacttccatctttgatgactttggtcactatgagaaaagacaagaagaagacggcccta cgaagccagcatcaggtggcaaggacagagagcagtaa |
|
Protein
| Protein ID | pfu_aug2.0_1051.1_04794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04794.t1 MSSPGVNDPFMPSYYNQAMPFPYLSQGLTDTGAWSNGSDQATMLSFGNYDYNSIFGGFGYPQFGWAPDYSGSDYWNNGQA RTDGRQAYDYYQKDTMIPQDPYAMNGGEFDVRDPSGVNSVDQGLKGMTISDKDGGQGVVTDQGHMDQNGAPMPPQSNGAP SQAKKTTSWAAIASQPARPQPKIQPRSIPRAPMNPNKNMDIGTWDQRNNAGGKQGGSGGNQQGRSWSAPRSRSMNNYSGN TNSNQSGNSSGNAGLSQISTSSSGNSATNHPVLEKLKSANQYNPRDFNLNPRGARFFIIKSYSEDDIHRSIKYSIWCSTD HGNKRLDQAFKEREGKGPIYLFFSVNGSGHFCGMAQMMSHLDYKNDAGVWAQDKWKGKFEVKWIYVKDVPNSQLRHIRLE NNENKPVTNSRDTQEVPPEKGKLVLKIIHTYKYATSIFDDFGHYEKRQEEDGPTKPASGGKDREQ |
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