Gene
| Gene Model ID | pfu_aug2.0_1051.1_04796 |
|---|---|
| Locus | scaffold1051.1 : 161340 ... 187875 : - |
| To GenomeBrowser | scaffold1051.1:161340..187875 |
| Genes list of scaffold | scaffold1051.1 |
| Synonym | pfu_aug1.0_9027.1_67965 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1051.1_04796.t1 | 1 | 1 | 7tm_1 | 8 | 186 | 8.5e-12 | 44.7 | 5.5e-15 | 1.4e-11 | 44.0 |
| pfu_aug2.0_1051.1_04796.t1 | 1 | 1 | Indigoidine_A | 284 | 571 | 0.0 | 396.5 | 0.0 | 0.0 | 395.9 |
| pfu_aug2.0_1051.1_04796.t1 | 1 | 1 | PfkB | 604 | 901 | 6.1e-25 | 87.9 | 5.4e-28 | 1.3e-24 | 86.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1051.1_04796.t1 | gi|736189490|ref|XP_010770988.1| | PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05-like [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_1051.1_04796.t1 | gi|676486682|ref|XP_009064051.1| | hypothetical protein LOTGIDRAFT_221393 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1051.1_04796.t1 | gi|657578166|ref|XP_008292944.1| | PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05-like isoform X2 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1051.1_04796.t1 | gi|583974454|ref|XP_006782612.1| | PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_1051.1_04796.t1 | gi|499026094|ref|XP_004563791.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1051.1_04796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04796.t1 atgaaagggatgaaggacgatcgttattttattccatatttagccggcatggatctgattgcctgtatgtttggagctag ttacgccatggcgctgaatttactcccggtgcgtttccatggtgactatctatgtaaaagtttgtggttcgccaatcagg cggcttctttgacagctggtttcatgctattggtcatcgctatccagaggtatctcaaagtttgtaggccttttaaagac aatatgactttattctggaagaaattggcgttgtttctcgtcgttgcaactgggattttattggccgctccttgttggat attttacggcgagatagaaatccgcaacgaagatctgaacataacaggatataggtgtagtgaaaaaggaaaggagtctc atagaacaatgatattagcgtataatatattactgttcgtagtagctgtgggcgggattttgtgtattagcggattttat gtcttggtcggtacgacgatatacagacaggtgcgatatcgcaaacgagttagtatttcgaacacgaagaaacgcagaaa accgagcggcgacagtagcagcgcgacgcaatctgaagtcgtacgccgttgttatagagattctcttgacatagattcac cagcgtttgattcttgtagatctccaagtgaatattttgattttgaggcagacgataaaagagccagtcggccatctttt ggcaatgcattgatggtacctcttcagggagagcctgtaaaacggagaagcttcgcggaggaactggagcgtccaatcaa agctctaagacagcagttacccaaagtccgcacaaatctggagatatcagaggaagtggctgatgcattgcattgtggga aaggagtagtggctcttgaaagtaccatcattacacatggcatgccatttcctcagaatctacagactgctttatcagtg gaacaaaaagtaagacattttggatctacccctgccaccataggaattataaaaggcaaaataaaagtaggtttatcaaa tgaggaacttgaatatttgtccaatccatcaatagaagttgttaaaacatcaagacgtgatttccctgtggtcattggtg agaaactgaatggtggaacaacagtgagtggaacaatggttgtggcacatatggcaggcattaaagtgttcgttactggt ggaataggtggagtgcatagaggtgtggaacagacaatggatataagtgcagatttaacagagttaggacggacacctgt tgtggtcgtatcgtctggtgtcaagtcaatcctggatattggtagaacactcgagtatctggagacacaaggagtttgtg tatgtagctatggaaacagtaagaatttcccagcattcctctcacctaagagtgggttctcagcaccttataatataaat gatccagatcaagctgcaaaaatcatagcatctcatcagagtctaggtttggattcaggtatgttaatagctgtacctat ccctgacacctacaccagccttggggaggagatagagagcaacataaaaactgctctagaagaggccagagagaacaata tatcaggaagggaaataacaccttatgtactgagcagattgaatgagatcagccaagggaaatctctacaagctaagaat aatgctacagttggcagtcagatagcaaagtcactggcgaactatgtcaccagggagaaagcaagccatgtaacaccttc caatcatgccactgttcacacagccaagaaacctgatgtgtctgatggagggacgtatcctggtagtgttcagcagtcgt ttggtggagtcggcaggaatgttgctgattgcctgagtcgacttgatgttaacactctatttatatctgccataggcaag gactcccataattctccattcaaagtgtactgtaaacacatgaaccagtacggtatagcagagttacatgatcataacac agctacgtactgtgccgttttgagggataatggggagcttgtgtttggaataggagacatggacatacacagccaaatca ctcctcagtatattgcgaagttccatgatgatatagtatcaagtaaacttatatgtctggatggcaatgtaacagtagag gccatgcagtatgtgtgtgaactggcaaaacaaaatggagtgcctgtatggtatgaaccaacagatctccacaaggctgt caaaccatttcagacaaaggtaaccagtcctgtacaatattcgtcacccaatatgaatgagctacgtgtcatgtccacat acatgtctaatggcacggattcacacaatactgagaatgtagacgagttaccacaagatcaagttatacgagaatgtgaa gataggttaaaaacagtaataaccaagattcctgttgttatagcaacaatcggtcgccatggtgttgttctttgtcagag gtcatgtcaaggaagcgcagaggacaaatataatgtaacagttgattggttccctgccacttgtcatggtgccaaggtca aggacattgtcagtgtatcaggggcaggagattgcatggtagcagctgttatctccggcttaatcaaaggtgttgctatg gaaacaaatataaagtcaggactgatagctgctcagatgtctttacaatcccatcatgcagtgccacataacatctcgcc taaatcccttcacctcacatatgagctaaatgagggacttaaaccacagagattaacatcttttacagtgaccaatgttt ag |
|
Protein
| Protein ID | pfu_aug2.0_1051.1_04796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1051.1_04796.t1 MKGMKDDRYFIPYLAGMDLIACMFGASYAMALNLLPVRFHGDYLCKSLWFANQAASLTAGFMLLVIAIQRYLKVCRPFKD NMTLFWKKLALFLVVATGILLAAPCWIFYGEIEIRNEDLNITGYRCSEKGKESHRTMILAYNILLFVVAVGGILCISGFY VLVGTTIYRQVRYRKRVSISNTKKRRKPSGDSSSATQSEVVRRCYRDSLDIDSPAFDSCRSPSEYFDFEADDKRASRPSF GNALMVPLQGEPVKRRSFAEELERPIKALRQQLPKVRTNLEISEEVADALHCGKGVVALESTIITHGMPFPQNLQTALSV EQKVRHFGSTPATIGIIKGKIKVGLSNEELEYLSNPSIEVVKTSRRDFPVVIGEKLNGGTTVSGTMVVAHMAGIKVFVTG GIGGVHRGVEQTMDISADLTELGRTPVVVVSSGVKSILDIGRTLEYLETQGVCVCSYGNSKNFPAFLSPKSGFSAPYNIN DPDQAAKIIASHQSLGLDSGMLIAVPIPDTYTSLGEEIESNIKTALEEARENNISGREITPYVLSRLNEISQGKSLQAKN NATVGSQIAKSLANYVTREKASHVTPSNHATVHTAKKPDVSDGGTYPGSVQQSFGGVGRNVADCLSRLDVNTLFISAIGK DSHNSPFKVYCKHMNQYGIAELHDHNTATYCAVLRDNGELVFGIGDMDIHSQITPQYIAKFHDDIVSSKLICLDGNVTVE AMQYVCELAKQNGVPVWYEPTDLHKAVKPFQTKVTSPVQYSSPNMNELRVMSTYMSNGTDSHNTENVDELPQDQVIRECE DRLKTVITKIPVVIATIGRHGVVLCQRSCQGSAEDKYNVTVDWFPATCHGAKVKDIVSVSGAGDCMVAAVISGLIKGVAM ETNIKSGLIAAQMSLQSHHAVPHNISPKSLHLTYELNEGLKPQRLTSFTVTNV |
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