Gene
| Gene Model ID | pfu_aug2.0_1052.1_08124 |
|---|---|
| Locus | scaffold1052.1 : 13783 ... 16475 : - |
| To GenomeBrowser | scaffold1052.1:13783..16475 |
| Genes list of scaffold | scaffold1052.1 |
| Synonym | pfu_aug1.0_17365.1_32799 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1052.1_08124.t1 | 2 | 1 | DDE_Tnp_4 | 114 | 137 | 3.0e-37 | 127.6 | 1.4 | 6700.0 | -3.5 |
| pfu_aug2.0_1052.1_08124.t1 | 1 | 1 | HTH_Tnp_4 | 299 | 348 | 1.3e-12 | 47.0 | 4.9e-16 | 2.4e-12 | 46.1 |
| pfu_aug2.0_1052.1_08124.t1 | 2 | 2 | DDE_Tnp_4 | 380 | 539 | 3.0e-37 | 127.6 | 1.50001e-40 | 7.6e-37 | 126.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1052.1_08124.t1 | gi|449665580|ref|XP_004206177.1| | 0.0 | |
| pfu_aug2.0_1052.1_08124.t1 | gi|340375971|ref|XP_003386507.1| | PREDICTED: uncharacterized protein LOC100637207 [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_1052.1_08124.t1 | gi|688604162|ref|XP_009293354.1| | PREDICTED: uncharacterized protein LOC103909393 isoform X2 [Danio rerio] | 0.0 |
| pfu_aug2.0_1052.1_08124.t1 | gi|340386546|ref|XP_003391769.1| | PREDICTED: uncharacterized protein LOC100636811 [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_1052.1_08124.t1 | gi|688604159|ref|XP_009293353.1| | PREDICTED: uncharacterized protein LOC103909393 isoform X1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1052.1_08124.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08124.t1 atggccatgacgtcacgcctcagcatccgggcttcagccacgggtaaaacaaaccgagataagaaaccgcgtgcgctgga atgtgcatgtaaacaaaacgagcgaggaacaaatacgatgggattatactcatgtgcaataggtggatgcgaggaaaaaa catatagaaggtcagctggtgtaaagttttattatctgaaaaatgttaaagatgaaaaagttgcaaaagcgtggaaagat cgcattttatcaacacgttcggacattaaacacaggtggcaaattaacgacgtggcgatatgcagcagacatttccctga tggagataagaggaacatgcctacgattataccaaaacctgcaggaaaccaagagcaaaaatggccagagaaaaaagaac gacgatctatcgtcagaaaattgcaatattctgcccattcgcctctcgaccaaggcgcaagtgctgacaatcgcgatgac aatgacacgggatcaccttcgccttctttgccttcgttgaatgaaaagcttgcgaccattaaatctacattggtcaaaac tcccccaaaagagatcgtgcccgacacagtgccacgaaatagcgacctaaaagatgaccttataaaggatctcaaaaggc tgctagaggaggaaaaacagaaggtgatggaattgaccattgcattaaatgatgcaaagcagaagataatatttggaatt gatcgattcaaaggcaacccaatggactttaacttttataccggacttccggattacctaacctttctctctttttgtga ttttcttcaacctgagagacacagggtatcttcaatgtactatgtgcacaaaacagcacacgagagttatgtgaatatga gaggcagggctccagtgcttagccttcacaacgaaatattcctcgttctttgtagattgaaacaaggttacagagagctt gaccttgcacatagatttgacatctctcagttcacggtcagcgacattgtaagcaagtgggtaaaacacatggatcatgt tttttcacagttaccactctgggcaccaaaggagcttattgtgaaaaacatgccaaaatcattcaccgacctcgggttcc atgacacaagatgtataattgactgcacagaaattttcattcagcagccttcttccaatttggttttgcagtctgttctt ttcagctcgtataaaaatcaccacacagcaaaaggtttagttggcattgcaccacacggaccaatcacatttgtgtccga tctgtatgttggctcggcaaccgattttgatatcaccaaagactgtggtatactgaatttattggaaccaaatgaccatg tcatggccgataaaggttttgaaattcaaagcttactagataagctgcaagttcgtgttgaccatcccccgatcttaagg ggtgtatctcaagtgaacattgaacaggaaatatctacaagaaggatagcaagactgcgaatccacgtagaacgggcaat tgaaaggattaaaaatttcggaatcctgtcagaatcatttccatactcaaagtggcgtatgttgaatagtatttggaaaa tatgtgccactttgacccattttcaacctcccatcattgatgactgctga |
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Protein
| Protein ID | pfu_aug2.0_1052.1_08124.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08124.t1 MAMTSRLSIRASATGKTNRDKKPRALECACKQNERGTNTMGLYSCAIGGCEEKTYRRSAGVKFYYLKNVKDEKVAKAWKD RILSTRSDIKHRWQINDVAICSRHFPDGDKRNMPTIIPKPAGNQEQKWPEKKERRSIVRKLQYSAHSPLDQGASADNRDD NDTGSPSPSLPSLNEKLATIKSTLVKTPPKEIVPDTVPRNSDLKDDLIKDLKRLLEEEKQKVMELTIALNDAKQKIIFGI DRFKGNPMDFNFYTGLPDYLTFLSFCDFLQPERHRVSSMYYVHKTAHESYVNMRGRAPVLSLHNEIFLVLCRLKQGYREL DLAHRFDISQFTVSDIVSKWVKHMDHVFSQLPLWAPKELIVKNMPKSFTDLGFHDTRCIIDCTEIFIQQPSSNLVLQSVL FSSYKNHHTAKGLVGIAPHGPITFVSDLYVGSATDFDITKDCGILNLLEPNDHVMADKGFEIQSLLDKLQVRVDHPPILR GVSQVNIEQEISTRRIARLRIHVERAIERIKNFGILSESFPYSKWRMLNSIWKICATLTHFQPPIIDDC |
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