Gene
| Gene Model ID | pfu_aug2.0_1053.1_11399 |
|---|---|
| Locus | scaffold1053.1 : 98016 ... 109475 : - |
| To GenomeBrowser | scaffold1053.1:98016..109475 |
| Genes list of scaffold | scaffold1053.1 |
| Synonym | pfu_aug1.0_1535.1_58563 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 23 member 1 isoform x3 | GO:0005515 GO:0006767 GO:0008520 GO:0009636 GO:0016021 GO:0016323 GO:0016324 GO:0033300 GO:0035461 GO:0035725 GO:0043229 GO:0044237 GO:0044238 GO:0070062 GO:0070837 GO:0070890 GO:0070904 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1053.1_11399.t2 | 2 | 1 | Xan_ur_permease | 40 | 120 | 0.0 | 219.5 | 1.2e-14 | 1.8e-10 | 39.8 |
| pfu_aug2.0_1053.1_11399.t2 | 2 | 2 | Xan_ur_permease | 127 | 344 | 0.0 | 219.5 | 0.0 | 0.0 | 185.7 |
Transcript
| Transcript ID | pfu_aug2.0_1053.1_11399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11399.t1 atgtccgagaactcgagagaacaaaatggagttcccaatggtaatgtagctgggagagaatcgacatcacgaggaatctt atacagagtagaggatacgccgccctttcatttgtgtattgcattcgccgtccagcaactaattctatgccttggaagta ctctatccattccctttatactaaccaaacttctgtgtgctgatggtaaccaagaagtcactgctcagctgctttgtatc tccatgttcatgtgcggtgtagctacactactacaaacaacaacgggagtcagactagggattatccaaggtggatcgca cacatttattggaccaatagctgctatgatggcattagacgtctgggaatgcccaacagttacaacaggcaagtttatag aactcatctga |
|
| Transcript ID | pfu_aug2.0_1053.1_11399.t2 |
| Definition | - |
>pfu_aug2.0_1053.1_11399.t2 atgtccgagaactcgagagaacaaaatggagttcccaatggtaatgtagctgggagagaatcgacatcacgaggaatctt atacagagtagaggatacgccgccctttcatttgtgtattgcattcgccgtccagcaactaattctatgccttggaagta ctctatccattccctttatactaaccaaacttctgtgtgctgatggtaaccaagaagtcactgctcagctgctttgtatc tccatgttcatgtgcggtgtagctacactactacaaacaacaacgggagtcagactagggattatccaaggtggatcgca cacatttattggaccaatagctgctatgatggcattagacgtctgggaatgcccaacagtattgcttagcgtgagtatag cctgtatactttgctatatactcaccgtcacggatgctattccattcgacgaaaacaacaagcacttccacacaagaaca gattcaaagcaggatatcataagtagtatgccttggttctactttcctcttccgttcaatttcggtacccctacagtatc cgttgcaggttttgttggaatgttaggtgctaccctgtctgctgtcatagagtcaacgggggactatttcttatgcgcaa ggatatcgaacgccaaaccaccgcctccccatgcagttaatagaggccatgctactgaagggtttgctagttttattagt ggccttgtcggcgctggtcacggcaccatatcatacagtggaaacataggagaaataggaataacaaagatagcaagtcg agtcgtatttcaaactgcaggtgctataatgattatatgtggattgatcggaaagttcggggctgttctttcaacaattc ccgaccctattattgggggaactcttactgttttatttggaatggtgaccgcggcgggaatttcaaccctgagatttgta gacatgacatcgtctagaaatgctgcagttctagcgacttctcttataatgggccttatgattccttcttgggtgtccaa acctgagaataggatagacacaggaatagatgaacttgatcaagtattacaggtacttatgggtactgctattttgattg gaggcatcatagcattcatactggataatactttaccaggaacacaagaggagaggggtattttaaagtggttaggcaac acagaagacgatgacactgaagatcgtgtggaggtgaactatgacataccactggtgacgagacttctagatcgagtgaa gtgttgttcgtactttccgatttcaccaacatttcatagggaaattgtatgtccacgcagcaccaacagagtagatgaaa acgaatttacggatattcaaatgtctgaaaagttgtaa |
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Protein
| Protein ID | pfu_aug2.0_1053.1_11399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11399.t1 MSENSREQNGVPNGNVAGRESTSRGILYRVEDTPPFHLCIAFAVQQLILCLGSTLSIPFILTKLLCADGNQEVTAQLLCI SMFMCGVATLLQTTTGVRLGIIQGGSHTFIGPIAAMMALDVWECPTVTTGKFIELI |
|
| Protein ID | pfu_aug2.0_1053.1_11399.t2 |
| Definition | - |
>pfu_aug2.0_1053.1_11399.t2 MSENSREQNGVPNGNVAGRESTSRGILYRVEDTPPFHLCIAFAVQQLILCLGSTLSIPFILTKLLCADGNQEVTAQLLCI SMFMCGVATLLQTTTGVRLGIIQGGSHTFIGPIAAMMALDVWECPTVLLSVSIACILCYILTVTDAIPFDENNKHFHTRT DSKQDIISSMPWFYFPLPFNFGTPTVSVAGFVGMLGATLSAVIESTGDYFLCARISNAKPPPPHAVNRGHATEGFASFIS GLVGAGHGTISYSGNIGEIGITKIASRVVFQTAGAIMIICGLIGKFGAVLSTIPDPIIGGTLTVLFGMVTAAGISTLRFV DMTSSRNAAVLATSLIMGLMIPSWVSKPENRIDTGIDELDQVLQVLMGTAILIGGIIAFILDNTLPGTQEERGILKWLGN TEDDDTEDRVEVNYDIPLVTRLLDRVKCCSYFPISPTFHREIVCPRSTNRVDENEFTDIQMSEKL |
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