Gene
| Gene Model ID | pfu_aug2.0_1053.1_11400 |
|---|---|
| Locus | scaffold1053.1 : 120224 ... 168585 : - |
| To GenomeBrowser | scaffold1053.1:120224..168585 |
| Genes list of scaffold | scaffold1053.1 |
| Synonym | pfu_aug1.0_19668.1_25818 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: unconventional myosin-ig | GO:0003774 GO:0005524 GO:0008152 GO:0016459 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1053.1_11400.t1 | 2 | 1 | Myosin_head | 15 | 412 | 0.0 | 627.9 | 0.0 | 0.0 | 466.8 |
| pfu_aug2.0_1053.1_11400.t1 | 2 | 2 | Myosin_head | 414 | 624 | 0.0 | 627.9 | 0.0 | 0.0 | 165.2 |
| pfu_aug2.0_1053.1_11400.t1 | 2 | 1 | Myosin_TH1 | 664 | 693 | 1.4e-33 | 115.8 | 2.4 | 4500.0 | -3.3 |
| pfu_aug2.0_1053.1_11400.t1 | 2 | 2 | Myosin_TH1 | 744 | 919 | 1.4e-33 | 115.8 | 8.7e-37 | 1.6e-33 | 115.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1053.1_11400.t1 | gi|543742710|ref|XP_005512203.1| | PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-Ig [Columba livia] | 0.0 |
| pfu_aug2.0_1053.1_11400.t1 | gi|701293786|ref|XP_010022851.1| | PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-Ig-like [Nestor notabilis] | 0.0 |
| pfu_aug2.0_1053.1_11400.t1 | gi|593737035|ref|XP_007113891.1| | PREDICTED: unconventional myosin-Id isoform X3 [Physeter catodon] | 0.0 |
| pfu_aug2.0_1053.1_11400.t1 | gi|560979661|ref|XP_006212082.1| | PREDICTED: unconventional myosin-Id [Vicugna pacos] | 0.0 |
| pfu_aug2.0_1053.1_11400.t1 | gi|671022016|ref|XP_008701815.1| | PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-Ig [Ursus maritimus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1053.1_11400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11400.t1 atggcaggaagcattcacgaaggccctgaatatggcatcggagactttgttctcctccgtgatgtcaccatggaggcttt tatggaaaatttaaaactccgatatgagaaaaaccggatctacacgtacattggtgaggtggtggtgtcagttaacccgt ataaaaccctcgatatcttcaacgctggatatgtggaccaatacaaagggagggaaatctatgagcgacctccacatata tttgcgctggcggacagcgcttacaaaaccatgaaacgttctagtcgtgatacatgtatagttatctcaggggaatcagg agcaggtaaaacggaggcctcgaagatcataatgcgatacatagcagccgtcactaatgttggtgggcagaaggaagtcg agagtggtggtattagtgaattagagagagttaaggaagtactgatcaaatccaacacaatccttgaggcattcggtaat gctaaaaccaacaggaatgataactctagcaggttcggcaaatacatggacattaattttgatttcaaaggtgaccccat tggtggccatatcaacaactacctcttagaaaagtcccgtgtcattcaccaacaagttggcgagagaaattttcactcat tttatcaactgatctccggagctaaggacgacaaactagcggaacttaaactagtgagggatccaatgaaatactacttc atcaaccaaggcggagatccaaagtgtcatacaatcaacgatcgtgaggattaccgaggtgtcatggccgccctaaagac gatgggtttctcgtttggtcacgcagaggctctgtggaagatagtagctgctgtactccacctgggaaacttacaatatg aagctgaggatgaccatgatatggcgggcattactgacaagacgttgctaggcaacatagccaagttgctatcggtaaca gacgaggaactgacaaaggccctttgttgccgtgtaatagctgcagggggtcaagttgtagagaaacaactaactaccaa ggaagcagagtacgcaaggaatgcttttgctaaggccatgtacgacagaatgttttcatggatcgtaggtcgtatcaacg aggccatagatcccaaggctagcggtataaactatatcggcaaaaataccgtcataggagtgctggatatctacggcttt gaaatctttgacaacaacagctttgaacaattttagatgttcctgaccgccatgtcacagaaactgagcaaacacgacca ctacacaagcagatctgtgaatccgtcagacaagacgttagaacataatcgtgactttaggatcaaacattacgctgggg aggtgacgtacgaggtaccgggatttatagataagaacaaagacacactgttccaggacttcaagagattgctctacaac agtaaagaggaaatcttgaagttaatgtggcctgaaggaaaacagcatataacagaaaccacaaagagaccggtaacagc ggggacaaacttcaaaaactccattatagccttggtggacaacctagctacaaaggaaccacactatgtgaggtgcgtca aacctaatgagataaaatctccgagttccttcaactacgagagagtaaagcatcaggttatgtacctaggattgatggag aacgtacgtgtacgtagggccggctttgctcacaggatgacgtacagtagattcctacagagatacaaatgtacaaccaa gtacacatggcctaatttccaaggaaacgaagtggatggtgtaaagaagattctccaaaccctgggacacgaaaaggact gcgagtatggacggtcaaaaatctttatacggtccccacaaactctcttttctttggaggagacaagggactccaggata ccaactatcattgtattcctacaaaagatgtggcgaggtggtaatgctaggaggaaggccaagtttatgagggctattta cctgattatggcccgcttcaggaaatacaaaatgagacagtacgtcctcaaggtcgtcaactcattcaagaatgtacggc agatgaaggactatgggaagactgttcaatggcccaaacctcccagtgtgttagagggtatggtcaccttgttacaaagg attcacaataggtggcgagccaacatgattctgagaaacattccaagagcagaatgggagatgttaaggttaaaggtcat ggccgcagaagcactgaaaggtcaaaggtcagagtggggcctgaagaggaaatgggatggaaattatcttgccatgtcca aggacaacagcagcacagcagactttgtgtcaaagatgaacaccctgaaggcaaaggaccacttcaacaaaattctgttt tcgtcttacgcaaagaaggtgaacaagcacaaccaatcagctgaccgggctgtagccgtaactgaccagtatgtttacaa acttgaccctcgaaagaagttcaaaccgcttaaaaaaggcattccgttatcagtagtcacaggtatctccgttactccag gagttgatcagcttgttatattacacatgtctgataacaatgacttagtactgtgtctacagaatcctggcaaagaagaa cgagtcggagaatttataggcacgttatgtagagcatggaaaagacaaggaaaagatctgaaagtgttagttgagaaacc ggcacattgcatgctgggaaacaaaagacggacaatcatggtaattgaattttga |
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Protein
| Protein ID | pfu_aug2.0_1053.1_11400.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11400.t1 MAGSIHEGPEYGIGDFVLLRDVTMEAFMENLKLRYEKNRIYTYIGEVVVSVNPYKTLDIFNAGYVDQYKGREIYERPPHI FALADSAYKTMKRSSRDTCIVISGESGAGKTEASKIIMRYIAAVTNVGGQKEVESGGISELERVKEVLIKSNTILEAFGN AKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIHQQVGERNFHSFYQLISGAKDDKLAELKLVRDPMKYYF INQGGDPKCHTINDREDYRGVMAALKTMGFSFGHAEALWKIVAAVLHLGNLQYEAEDDHDMAGITDKTLLGNIAKLLSVT DEELTKALCCRVIAAGGQVVEKQLTTKEAEYARNAFAKAMYDRMFSWIVGRINEAIDPKASGINYIGKNTVIGVLDIYGF EIFDNNSFEQFXMFLTAMSQKLSKHDHYTSRSVNPSDKTLEHNRDFRIKHYAGEVTYEVPGFIDKNKDTLFQDFKRLLYN SKEEILKLMWPEGKQHITETTKRPVTAGTNFKNSIIALVDNLATKEPHYVRCVKPNEIKSPSSFNYERVKHQVMYLGLME NVRVRRAGFAHRMTYSRFLQRYKCTTKYTWPNFQGNEVDGVKKILQTLGHEKDCEYGRSKIFIRSPQTLFSLEETRDSRI PTIIVFLQKMWRGGNARRKAKFMRAIYLIMARFRKYKMRQYVLKVVNSFKNVRQMKDYGKTVQWPKPPSVLEGMVTLLQR IHNRWRANMILRNIPRAEWEMLRLKVMAAEALKGQRSEWGLKRKWDGNYLAMSKDNSSTADFVSKMNTLKAKDHFNKILF SSYAKKVNKHNQSADRAVAVTDQYVYKLDPRKKFKPLKKGIPLSVVTGISVTPGVDQLVILHMSDNNDLVLCLQNPGKEE RVGEFIGTLCRAWKRQGKDLKVLVEKPAHCMLGNKRRTIMVIEF |
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