Gene
| Gene Model ID | pfu_aug2.0_1053.1_11401 |
|---|---|
| Locus | scaffold1053.1 : 169546 ... 175000 : + |
| To GenomeBrowser | scaffold1053.1:169546..175000 |
| Genes list of scaffold | scaffold1053.1 |
| Synonym | pfu_aug1.0_10277.1_53511 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| orm1-like protein 1-like | GO:0005789 GO:0006665 GO:0016021 GO:0065007 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1053.1_11401.t1 | 1 | 1 | ORMDL | 11 | 59 | 5.0e-11 | 42.3 | 8.1e-15 | 6.0e-11 | 42.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1053.1_11401.t1 | gi|524865284|ref|XP_005089472.1| | PREDICTED: ORM1-like protein 1-like [Aplysia californica] | 2.0e-19 |
| pfu_aug2.0_1053.1_11401.t1 | gi|675875876|ref|XP_009023498.1| | hypothetical protein HELRODRAFT_177041 [Helobdella robusta] | 3.0e-18 |
| pfu_aug2.0_1053.1_11401.t1 | gi|676431091|ref|XP_009046137.1| | hypothetical protein LOTGIDRAFT_224625 [Lottia gigantea] | 3.0e-18 |
| pfu_aug2.0_1053.1_11401.t1 | gi|657528705|ref|XP_008291959.1| | PREDICTED: ORM1-like protein 2 [Stegastes partitus] | 5.0e-14 |
| pfu_aug2.0_1053.1_11401.t1 | gi|511961856|ref|XP_004799115.1| | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1053.1_11401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11401.t1 atgaatatcggcaccgccaccagcgatgacaatccgacacattcgtacctcggaagtcgtggaatatggattacctatgt actgatcgtgctgatagcacacttcatgctgctcagtgttccctttcttaccgtagccatggcatggtcactcaccaatg tcatccattgtgttgtaccccatggggaaccccagaacagggcaaggcccgcatgctaa |
|
Protein
| Protein ID | pfu_aug2.0_1053.1_11401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1053.1_11401.t1 MNIGTATSDDNPTHSYLGSRGIWITYVLIVLIAHFMLLSVPFLTVAMAWSLTNVIHCVVPHGEPQNRARPAC |
|