Gene
| Gene Model ID | pfu_aug2.0_10559.1_33088 |
|---|---|
| Locus | scaffold10559.1 : 1 ... 5668 : + |
| To GenomeBrowser | scaffold10559.1:1..5668 |
| Genes list of scaffold | scaffold10559.1 |
| Synonym | pfu_aug1.0_9778.1_02802 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10559.1_33088.t1 | 1 | 1 | GATase_7 | 5 | 83 | 2.7e-17 | 62.6 | 1.0e-20 | 3.9e-17 | 62.1 |
| pfu_aug2.0_10559.1_33088.t1 | 1 | 1 | GATase_6 | 5 | 76 | 4.3e-12 | 46.1 | 1.5e-15 | 5.6e-12 | 45.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10559.1_33088.t1 | gi|558122840|ref|XP_006114565.1| | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Pelodiscus sinensis] | 4.06377e-44 |
Transcript
| Transcript ID | pfu_aug2.0_10559.1_33088.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10559.1_33088.t1 atttctaaagactttggtttccagagaagaacggagtgtgatagtgaagttatcatacacttatacgtaaaaggtggcat tgaatttgccgccaaacagttggatggcgtctttgcgttcgtgctgcttgacaccaccaaaagaaaagtttatctcggga gggacacctttggtatcagacctatgttcaagttacaaaatgcacatggatttatcgctgtttgctcggaggcaaaaggc ttgttggcatttaaaccagacaaccattcggataaaatagaacctttttctcctggtcaagttgaagcttacgaacttca acaagacggaaaagcaagatttatagagaagaaaacatttcacacaattggggaagagcctaattacataacaactatat cttcccttgatggagatgtcggaaagaatcttcgtctgttgctagaggctgctgtgtcaaaaaggttgatgtcggataga agg |
|
Protein
| Protein ID | pfu_aug2.0_10559.1_33088.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10559.1_33088.t1 ISKDFGFQRRTECDSEVIIHLYVKGGIEFAAKQLDGVFAFVLLDTTKRKVYLGRDTFGIRPMFKLQNAHGFIAVCSEAKG LLAFKPDNHSDKIEPFSPGQVEAYELQQDGKARFIEKKTFHTIGEEPNYITTISSLDGDVGKNLRLLLEAAVSKRLMSDR R |
|