Gene
| Gene Model ID | pfu_aug2.0_106.1_20232 |
|---|---|
| Locus | scaffold106.1 : 1756 ... 10988 : + |
| To GenomeBrowser | scaffold106.1:1756..10988 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform x2 | GO:0016311 GO:0016791 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20232.t1 | 2 | 1 | Y_phosphatase | 27 | 49 | 5.0e-08 | 32.5 | 0.061 | 110.0 | 1.9 |
| pfu_aug2.0_106.1_20232.t1 | 1 | 1 | DSPc | 32 | 159 | 7.6e-21 | 74.0 | 4.5e-24 | 8.4e-21 | 73.9 |
| pfu_aug2.0_106.1_20232.t1 | 1 | 1 | PTPlike_phytase | 33 | 123 | 4.0e-07 | 30.1 | 3.0e-10 | 5.6e-07 | 29.7 |
| pfu_aug2.0_106.1_20232.t1 | 2 | 2 | Y_phosphatase | 81 | 154 | 5.0e-08 | 32.5 | 2.1e-10 | 3.9e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20232.t1 | gi|524893667|ref|XP_005103342.1| | PREDICTED: phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20232.t1 | gi|198415750|ref|XP_002120903.1| | PREDICTED: phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_106.1_20232.t1 | gi|296434262|ref|NP_001171798.1| | protein-tyrosine phosphatase mitochondrial 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_106.1_20232.t1 | gi|260826129|ref|XP_002608018.1| | hypothetical protein BRAFLDRAFT_58222 [Branchiostoma floridae] | 4.2039e-45 |
| pfu_aug2.0_106.1_20232.t1 | gi|751441087|ref|XP_011193125.1| | PREDICTED: phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 isoform X1 [Bactrocera cucurbitae] | 5.60519e-45 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20232.t1 atgtccaaggttactagcagggaatggtacaacagaattgatgacaatgttattttgggagcactgccactaaaatcatg gaataaaacattagttgaaaaagaaaatgtaagaggaatagtttctctgactgaggattttgagactaagggccttgtaa atactcaagaggtaagtgaaaaggaaactttgaggtcatatgtaaacttgtcacgtctacaaattttttatgccgggacg ccatcacaagaacaaattaacgaggccctaaggtttatagacaggcatcagcgacaggagcacagcgtgtatgtacactg taaggctggacggacacgtagcgctacggtcgtagcctgctatctaatacagaagcatggttacagtcctatggaagcag tagatttcatccgagcaaagcgaccccacatctggctccgagaagctcagctggagtccttacaggagttccataaacac tccagggtcaggaaaagttttactggagcctga |
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Protein
| Protein ID | pfu_aug2.0_106.1_20232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20232.t1 MSKVTSREWYNRIDDNVILGALPLKSWNKTLVEKENVRGIVSLTEDFETKGLVNTQEVSEKETLRSYVNLSRLQIFYAGT PSQEQINEALRFIDRHQRQEHSVYVHCKAGRTRSATVVACYLIQKHGYSPMEAVDFIRAKRPHIWLREAQLESLQEFHKH SRVRKSFTGA |
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