Gene
| Gene Model ID | pfu_aug2.0_106.1_20236 |
|---|---|
| Locus | scaffold106.1 : 47286 ... 51391 : + |
| To GenomeBrowser | scaffold106.1:47286..51391 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | pfu_aug1.0_89458.1_27959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20236.t1 | 1 | 1 | PIH1 | 24 | 346 | 2.66247e-44 | 151.9 | 0.0 | 3.36312e-44 | 151.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20236.t1 | gi|524910494|ref|XP_005110123.1| | PREDICTED: PIH1 domain-containing protein 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20236.t1 | gi|676492517|ref|XP_009065943.1| | hypothetical protein LOTGIDRAFT_236638 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_106.1_20236.t1 | gi|632957125|ref|XP_007894304.1| | PREDICTED: PIH1 domain-containing protein 2 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_106.1_20236.t1 | gi|632957123|ref|XP_007894303.1| | PREDICTED: PIH1 domain-containing protein 2 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_106.1_20236.t1 | gi|556949363|ref|XP_005987329.1| | PREDICTED: PIH1 domain-containing protein 2 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20236.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20236.t1 atgtcgcaggaatatgataaggactccatgatgaagcaggcgcagaatatctggaccatgctggacgaaatggcggaaaa caatccacaggcgtatcagaaattcataaacgagaaaaccaaggaaggcatggagtatatgaaaccaccagagccccata tgtgtgtacagaccataatgttgaggccagatcagatgacctactttataaacttctgttgttggaatcgtgtccctgaa ccaaagtcttcagaagatgccgtgcctgtaggtggcaccactgtgttctctgatacggaggaggatcaagaaaaattttc atattcagccgtggcttttaaccccaagattctcgaagaatatggccgcaaaacaaagtacccaaatgaccgtgatacac tagtgatgctggctattgactatatacaagcccagcataatgtgactctatcaaggaactacacacttcttggaaatcta cgtaaaatgcagaaggcgtttacaggtaaatctgaccaggaaatggacgagcagctatcggagcttgagaacagctttgg gcctctcggccctggcgcgaaagattcattactgaataaactatcaaatatgtccaccggtgattcaaataccaaggtga aaaccaatacaccaggctcaaatgttatgaacgaattgtcgggaataagaattccctccgaagtgcaaaacgagaagaaa aaagctaatttgattcaggaaatttctacagaagtaaatgaaaaatcgaacaatagcaaaagtgtgttggcatgtccaaa gtacaagttgagtgagatacatgtagaccatggtggacaagattgtttgattgtgaacatagaacttccgggtgtacttg gtgtcagagaatgcgaacttgatatttctcaggacgaccttgaacttgaagtaccggagaagttcttccttcatctgaag ttaccaaaagaaattttggaagatgaagcgagtgcaaagttcctgaaaaagtcttcatgtctgaaattaacgttacctct aaaactctaa |
|
Protein
| Protein ID | pfu_aug2.0_106.1_20236.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20236.t1 MSQEYDKDSMMKQAQNIWTMLDEMAENNPQAYQKFINEKTKEGMEYMKPPEPHMCVQTIMLRPDQMTYFINFCCWNRVPE PKSSEDAVPVGGTTVFSDTEEDQEKFSYSAVAFNPKILEEYGRKTKYPNDRDTLVMLAIDYIQAQHNVTLSRNYTLLGNL RKMQKAFTGKSDQEMDEQLSELENSFGPLGPGAKDSLLNKLSNMSTGDSNTKVKTNTPGSNVMNELSGIRIPSEVQNEKK KANLIQEISTEVNEKSNNSKSVLACPKYKLSEIHVDHGGQDCLIVNIELPGVLGVRECELDISQDDLELEVPEKFFLHLK LPKEILEDEASAKFLKKSSCLKLTLPLKL |
|