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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_106.1_20238
Locus scaffold106.1 : 61386 ... 67287 : +
To GenomeBrowser scaffold106.1:61386..67287
Genes list of scaffold scaffold106.1
Synonym pfu_aug1.0_5765.1_45289

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_106.1_20238.t1 gi|676430700|ref|XP_009046012.1| hypothetical protein LOTGIDRAFT_237762 [Lottia gigantea] 7.0e-26
pfu_aug2.0_106.1_20238.t1 gi|524890553|ref|XP_005101822.1| PREDICTED: coiled-coil domain-containing protein 24-like isoform X2 [Aplysia californica] 1.0e-25
pfu_aug2.0_106.1_20238.t1 gi|524890551|ref|XP_005101821.1| PREDICTED: coiled-coil domain-containing protein 24-like isoform X1 [Aplysia californica] 7.0e-25
pfu_aug2.0_106.1_20238.t1 gi|156396644|ref|XP_001637503.1| predicted protein [Nematostella vectensis] 2.0e-19
pfu_aug2.0_106.1_20238.t1 gi|632963869|ref|XP_007898121.1| PREDICTED: coiled-coil domain-containing protein 24 isoform X2 [Callorhinchus milii] 2.0e-16

Transcript
Transcript IDpfu_aug2.0_106.1_20238.t1
Definition-
>pfu_aug2.0_106.1_20238.t1
atggagccaacatttgaccttagtggatatgagccgcctatttctctgtggcagattgtagaacagcatgtacctaaaca
tgagcatgaggagatcaagaatatgttaggacagtctctagtggaccaaagccttgaacttcataacgagtggatttttc
tacctcagtcatattatggagcaggacctgggacatcacggggtaattctagaccaggtacagctagatcacgagatggc
agggaaacaccaatgatatccacccctactagcagtgatagggcatcagctgcttcaacactcagtgaggaaattgaatc
catgaacgacaaaatgaatttcttaaagtttgacgaagttgttcaacatctaaaggagactttagaggatgagatagaga
cgctgttaagtgacatccactttctgtacgagtgtttggatgatgaagcaacgtacagggcagagacacagggtacttac
tcaagggagccttctatagcagagctccaaacagaaagatcaaagatggagcaggaattgttgtcgactgatttagtgcc
tcaaccaaatattccaccacaaagagcggcacgtcccataggaaacactgtacctctaaagaaattgggaggacagcttc
caaactcattgaagataaaagtgaacggtttgacaggtgtagattctagaaatgattcaggtcatagtgtgagactgaca
tacgataaacaagctacaaggcctggacccatgagggcctctcatgccatatcactcggccataataattctagtacaaa
cagtccaagtgatatttcacagaacaatttagtaggagttgtcagggttggtaagaggcctgatacaatgtccggcatta
taaaaggatcagagagtgctacttcagactatgacagtattacaactcctcaccctccgtctggaccacgcccacaggta
cgaccttcatcggcagacaggttcagaagaatggtccaggattgtaggaattcagagtga

Protein
Protein IDpfu_aug2.0_106.1_20238.t1
Definition-
>pfu_aug2.0_106.1_20238.t1
MEPTFDLSGYEPPISLWQIVEQHVPKHEHEEIKNMLGQSLVDQSLELHNEWIFLPQSYYGAGPGTSRGNSRPGTARSRDG
RETPMISTPTSSDRASAASTLSEEIESMNDKMNFLKFDEVVQHLKETLEDEIETLLSDIHFLYECLDDEATYRAETQGTY
SREPSIAELQTERSKMEQELLSTDLVPQPNIPPQRAARPIGNTVPLKKLGGQLPNSLKIKVNGLTGVDSRNDSGHSVRLT
YDKQATRPGPMRASHAISLGHNNSSTNSPSDISQNNLVGVVRVGKRPDTMSGIIKGSESATSDYDSITTPHPPSGPRPQV
RPSSADRFRRMVQDCRNSE

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