Gene
| Gene Model ID | pfu_aug2.0_106.1_20240 |
|---|---|
| Locus | scaffold106.1 : 114706 ... 131399 : + |
| To GenomeBrowser | scaffold106.1:114706..131399 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | pfu_aug1.0_6931.1_02347 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20240.t1 | 1 | 1 | WW | 33 | 60 | 1.2e-06 | 28.2 | 1.3e-09 | 2.4e-06 | 27.2 |
| pfu_aug2.0_106.1_20240.t1 | 3 | 1 | EF-hand_2 | 69 | 158 | 4.1e-10 | 39.8 | 2.5e-12 | 4.7e-09 | 36.3 |
| pfu_aug2.0_106.1_20240.t1 | 2 | 1 | EF-hand_3 | 162 | 251 | 2.8e-20 | 72.1 | 5.5e-23 | 1.0e-19 | 70.3 |
| pfu_aug2.0_106.1_20240.t1 | 1 | 1 | ZZ | 258 | 301 | 7.2e-14 | 51.0 | 8.1e-17 | 1.5e-13 | 50.0 |
| pfu_aug2.0_106.1_20240.t1 | 2 | 2 | EF-hand_3 | 313 | 327 | 2.8e-20 | 72.1 | 4.0 | 7400.0 | -2.9 |
| pfu_aug2.0_106.1_20240.t1 | 3 | 2 | EF-hand_2 | 437 | 481 | 4.1e-10 | 39.8 | 0.46 | 860.0 | -0.1 |
| pfu_aug2.0_106.1_20240.t1 | 3 | 3 | EF-hand_2 | 678 | 701 | 4.1e-10 | 39.8 | 1.9 | 3500.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20240.t1 | gi|585709307|ref|XP_006824328.1| | PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_106.1_20240.t1 | gi|524897300|ref|XP_005105113.1| | PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20240.t1 | gi|524908335|ref|XP_005109269.1| | PREDICTED: dystrophin-like isoform X6 [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20240.t1 | gi|390356797|ref|XP_003728860.1| | 0.0 | |
| pfu_aug2.0_106.1_20240.t1 | gi|524908333|ref|XP_005109268.1| | PREDICTED: dystrophin-like isoform X5 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20240.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20240.t1 atgatatccggtgattggaaagaactggggccatgtgctgtaccaaaggcacatgtagaaagtcaaagagcgtcaatatc atcataagcagctgttgatggttgggaaaaagcagaaacagaatctggtgtgccttattacatatgtgatacaacagacg taacatcctgggatcacccatgtatgttgaagatactacaagaattagtgcatcagatccacctgtcggcagtggaggac acattctatcatcatggttacagggagggtgacgaggatgtggtatcttgtgggtcattactgaccgtactgaccagtct cttcactaacatggatctacgcagcgactttccggttagaaccgctggtgcttacgcagaagtcatgctgaattttctcc tatctctgtttgataaagagaggacaggcagtgtaccattgctacctacgaaactgatcctgattcttctatctgccgca agactagctgaaaaatataaagcattttacaaggagatagcagatcctagcacttttgtcagcggtagaagatttaagat atttttggagaatgtcataaagctgcctaactttctgagggaaggaactgctttcggaaacaatgtaaaggcaacagtgg ctcattgcatcaatatgagcagtagttttgttggtttgtcagaggacacattctatgcctggttactaagggaaccacag atcttggtttggttaccaacatttcatcgtgtaatagcttctgagacggtgagacatgataccaaatgtaatgtctgtaa gtgtttacctattgtaggattcagatacaaatgtttacagtgtttcaaattcaacctatgtcagcgatgtttctacacgg gatgtactagaaagaaccacaagctgaagcatcccatacaggagtactgtatagtgagctcaattaaagtagatgccaaa gccttcatgaagaccatatgtaacaatctcagtaagaaacaccgacaaaaagccagacagaaatacccccctgtaatgtc agatagtaaactccaagaccaaagctgtgctgcagtgacaccctcatcatcaaatcttactgctaaccaagctgaggaag agaagaaaggtgcggtattacaggatcaagatacaaataaacaacaagactgcaagccgcaacgtgcaaataaacaaggc aaacgtatctgtgctgatgataaggagaacagacaacccgatattcccatggtaactgaggcagtcctccccatacctaa gtctgaggacttaccccacaaggcacctcattcctcaaaagatcaggtggtgacattaatgcagcagaggaaggagttgg agaaagtaatatcccagctggaagaggaaaacaggatgctacatcagcagctgaatacaatgaaggaatcttcagacacg gagagtaacatgtctgtagctgtcaactatcaggataagattaagagacttaaagggaatgagttttgtacacctctcca tgtaaatacagatcctcacagaccaggtggtgacaggactgatctatactcatcacaccactacagtcccctgggtgtag agccactcagcccgatctcctgtagtcctcatgctgagaacacggaggggagtggagtacccaccgcactgtcaagtcac atgacggcgtactcgtcatgtctgccgtcttccatgtttactatggtatcacatgacacagagctttctccgggcataca gtataaaggccaggccaatcctcagtccccatgttgtaggtatcggacgtctaccaaggatgatatctctattctctccg acaccaatcaggactttatatctggtctccataacaaagacttcagtcccgagcattatgatccgtcccagccttaccga gtcccagatagcggggacgtgccgtatgacagtttggacgatatagatgccagcccctcccacttcactctgccgtcttt tgccaacagtttggaccatctggatggagaagaggaaatagaacagatgatccaaaacctggaccagatatttcctagta atctctcatactcagcatactctgtacttgatacagaggagcctgatgaaatgatccaagcagcatcaagtatcggcaag gccatgtcgcagctggtgtcagaggcaatacaggccaaatactcataa |
|
Protein
| Protein ID | pfu_aug2.0_106.1_20240.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20240.t1 MISGDWKELGPCAVPKAHVESQRASISSXAAVDGWEKAETESGVPYYICDTTDVTSWDHPCMLKILQELVHQIHLSAVED TFYHHGYREGDEDVVSCGSLLTVLTSLFTNMDLRSDFPVRTAGAYAEVMLNFLLSLFDKERTGSVPLLPTKLILILLSAA RLAEKYKAFYKEIADPSTFVSGRRFKIFLENVIKLPNFLREGTAFGNNVKATVAHCINMSSSFVGLSEDTFYAWLLREPQ ILVWLPTFHRVIASETVRHDTKCNVCKCLPIVGFRYKCLQCFKFNLCQRCFYTGCTRKNHKLKHPIQEYCIVSSIKVDAK AFMKTICNNLSKKHRQKARQKYPPVMSDSKLQDQSCAAVTPSSSNLTANQAEEEKKGAVLQDQDTNKQQDCKPQRANKQG KRICADDKENRQPDIPMVTEAVLPIPKSEDLPHKAPHSSKDQVVTLMQQRKELEKVISQLEEENRMLHQQLNTMKESSDT ESNMSVAVNYQDKIKRLKGNEFCTPLHVNTDPHRPGGDRTDLYSSHHYSPLGVEPLSPISCSPHAENTEGSGVPTALSSH MTAYSSCLPSSMFTMVSHDTELSPGIQYKGQANPQSPCCRYRTSTKDDISILSDTNQDFISGLHNKDFSPEHYDPSQPYR VPDSGDVPYDSLDDIDASPSHFTLPSFANSLDHLDGEEEIEQMIQNLDQIFPSNLSYSAYSVLDTEEPDEMIQAASSIGK AMSQLVSEAIQAKYS |
|