Gene
| Gene Model ID | pfu_aug2.0_106.1_20244 |
|---|---|
| Locus | scaffold106.1 : 181291 ... 201580 : - |
| To GenomeBrowser | scaffold106.1:181291..201580 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | pfu_aug1.0_1739.1_15596 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20244.t1 | 1 | 1 | Exo_endo_phos | 33 | 353 | 5.3e-24 | 85.5 | 4.4e-28 | 6.6e-24 | 85.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20244.t1 | gi|676480452|ref|XP_009062064.1| | hypothetical protein LOTGIDRAFT_106923 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_106.1_20244.t1 | gi|571539081|ref|XP_006564211.1| | PREDICTED: twin protein isoform X1 [Apis mellifera] | 0.0 |
| pfu_aug2.0_106.1_20244.t1 | gi|749754346|ref|XP_011139605.1| | PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform X3 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_106.1_20244.t1 | gi|749754344|ref|XP_011139604.1| | PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_106.1_20244.t1 | gi|571539085|ref|XP_006564212.1| | PREDICTED: twin protein isoform X2 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20244.t1 atgagcgcagatctcaattcaacggcgcctccattacgtcactggatgcctttaacacagccagaacgaggcaaaacgtc agccattttcactgtgatgtgttacaatgtcctatgtgacaaatactgtaccagacagatttatggttactgtccgtcct gggccctcaactgggaatacaggaaaaagggcatcctagaggaaatcaaacattgttctgctgacatcatcagcttacag gaggtggagacggaccaatttcacaaatttttcctgccagagctccagagagacgggtatgatggtatattttcggccaa gtctagagcgaggaccatgaacgaggcagaccggaagtacgtcgacggctgcgcaatcttcttcaaaaaatccaagttca cactggtgaaggatcatctaatagagttcaatcaactagccatggcgaatgctgagggttcagatgacatgctgaacagg gtcatgacaaaagacaatattggagtgcccccagatggtcaagttaaacagccagttatggtagctacagcccacattca ctgggacccggaattctccgatgtcaaactcatccagactatgatgttgatgtggaagctacaagacatcattaaggagg atgttcacagtttccgtcccaactcagctggtgcattagacttgaacagtataccatttatcttgtgtggtgatctcaac tcgttacctgaatctggtgtggtagaattcctaacctcagggaaagttgccaggacacacgaagattttaaagatattag ctacgaagatgcaattcaaagaatcaatggatcaaatgacaaggagtgcttcactcatgaattccagctcaatagggctt atgacaatgacattatgccatttaccaattatacatatgacttcaagggcatcatcgattacattttcttctccaagaaa catttcaaccttttgggtttactaggcccgctcgatcaggactggttccgacagaataaggtcgtaggctgtccccaccc tcatgtcccttccgatcatttcccactgctcgtagagtttgaaatgccagtacaacagagttccatcaacaattcatcca acacacagaaacacagatag |
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Protein
| Protein ID | pfu_aug2.0_106.1_20244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20244.t1 MSADLNSTAPPLRHWMPLTQPERGKTSAIFTVMCYNVLCDKYCTRQIYGYCPSWALNWEYRKKGILEEIKHCSADIISLQ EVETDQFHKFFLPELQRDGYDGIFSAKSRARTMNEADRKYVDGCAIFFKKSKFTLVKDHLIEFNQLAMANAEGSDDMLNR VMTKDNIGVPPDGQVKQPVMVATAHIHWDPEFSDVKLIQTMMLMWKLQDIIKEDVHSFRPNSAGALDLNSIPFILCGDLN SLPESGVVEFLTSGKVARTHEDFKDISYEDAIQRINGSNDKECFTHEFQLNRAYDNDIMPFTNYTYDFKGIIDYIFFSKK HFNLLGLLGPLDQDWFRQNKVVGCPHPHVPSDHFPLLVEFEMPVQQSSINNSSNTQKHR |
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