Gene
| Gene Model ID | pfu_aug2.0_106.1_20248 |
|---|---|
| Locus | scaffold106.1 : 268055 ... 276450 : - |
| To GenomeBrowser | scaffold106.1:268055..276450 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | pfu_aug1.0_12488.1_46510 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutamate mitochondrial | GO:0006520 GO:0016639 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20248.t1 | 1 | 1 | ELFV_dehydrog_N | 103 | 232 | 0.0 | 159.5 | 0.0 | 0.0 | 158.5 |
| pfu_aug2.0_106.1_20248.t1 | 2 | 1 | ELFV_dehydrog | 253 | 389 | 1.7e-23 | 83.4 | 5.1e-26 | 2.5e-22 | 79.6 |
| pfu_aug2.0_106.1_20248.t1 | 2 | 2 | ELFV_dehydrog | 397 | 443 | 1.7e-23 | 83.4 | 0.031 | 150.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20248.t1 | gi|41282194|ref|NP_955839.2| | glutamate dehydrogenase 1b [Danio rerio] | 0.0 |
| pfu_aug2.0_106.1_20248.t1 | gi|28277658|gb|AAH44202.1| | Glutamate dehydrogenase 1b [Danio rerio] | 0.0 |
| pfu_aug2.0_106.1_20248.t1 | gi|734594180|ref|XP_010733442.1| | PREDICTED: glutamate dehydrogenase, mitochondrial [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_106.1_20248.t1 | gi|348508526|ref|XP_003441805.1| | PREDICTED: glutamate dehydrogenase, mitochondrial-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20248.t1 atgtggagaaaaggaactcagcaagttatcagaagtcttaggactccattaaatcagacattgctgccacaactgtccag acttcctcgggcatcatacagcaaagaacctgactatgaagttacagacgaaatgagggaactcgaccagctttcatttg cacaaactgtagataaattctttgataaggcaagcgagatatgcgaagaaagattagcagaaagcatggtaacaagagat gtaaagatggctcctgtggagaaaaggaagaaggtcaggggcatcttgaacaatatcaagccctgcaataatgtaatgga gatcaatttccccatcaaaagggattctggagactatgaaatcataagagcctggagagcacagcatagtcatcatcgca aaccatgtaaaggaggaattcgatttagtatggatgtttgtgaggatgaggtgaaagccttagctgcattgatgacctat aagtgtgcggtggtggatgtaccgtttggtggggctaaagcaggagtgatgatcaatccacgagaatactcagaaagaga gctggaaaaaatcacccgcagattcaccttggacatggcaagaaaaagtttcataggaccacaccttgatgtccctgccc ctgacatgggtactggagaacgagaaatggcctggattgctgatacatatgccaacactattggttctggagacatcaat gctcatgcctgtgtgaccggtaaaccaattacacaaggagggatccacggtcgagtgtctgcaacaggaaggggagttta ccatggcattgagaactttattatggacgctagctacatgagtatgattgggctgactccaggattcaaagacaagacct tcattctacagggctttggtaacgtgggactgcactctatgaggtacctacacagagctggtgctgtatgtgttggagtg aaggagattgattgcagcatctacaataaacagggtattgatcctaaggaattggagaattataaactggagcatggaac aatcaaaggttttcccaatgcagagccatttgagggggatctgttgatcgaacaatgtgatattctggtaccagcagcta gtgaaagagtacttacatgtgacaacgcagctcaagttaaagcaaagggtgcctctgagaaggatatagtgcactctggt ttgtcatacaccatggagaggtcagccaagactattatgaggacggcgttggattacaatctcggactagatctcaggac tgctgcttatatctcatctatatccaaaatcttcaaagtacagtacgagatgggtcttatcttcacttag |
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Protein
| Protein ID | pfu_aug2.0_106.1_20248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20248.t1 MWRKGTQQVIRSLRTPLNQTLLPQLSRLPRASYSKEPDYEVTDEMRELDQLSFAQTVDKFFDKASEICEERLAESMVTRD VKMAPVEKRKKVRGILNNIKPCNNVMEINFPIKRDSGDYEIIRAWRAQHSHHRKPCKGGIRFSMDVCEDEVKALAALMTY KCAVVDVPFGGAKAGVMINPREYSERELEKITRRFTLDMARKSFIGPHLDVPAPDMGTGEREMAWIADTYANTIGSGDIN AHACVTGKPITQGGIHGRVSATGRGVYHGIENFIMDASYMSMIGLTPGFKDKTFILQGFGNVGLHSMRYLHRAGAVCVGV KEIDCSIYNKQGIDPKELENYKLEHGTIKGFPNAEPFEGDLLIEQCDILVPAASERVLTCDNAAQVKAKGASEKDIVHSG LSYTMERSAKTIMRTALDYNLGLDLRTAAYISSISKIFKVQYEMGLIFT |
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