Gene
| Gene Model ID | pfu_aug2.0_106.1_20249 |
|---|---|
| Locus | scaffold106.1 : 285060 ... 300320 : - |
| To GenomeBrowser | scaffold106.1:285060..300320 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20249.t1 | 2 | 1 | Tetraspannin | 2 | 138 | 0.0 | 162.7 | 2.3e-30 | 8.5e-27 | 93.8 |
| pfu_aug2.0_106.1_20249.t1 | 5 | 1 | DUF2754 | 10 | 16 | 7.7e-09 | 35.4 | 4.0 | 15000.0 | -4.3 |
| pfu_aug2.0_106.1_20249.t1 | 5 | 2 | DUF2754 | 49 | 56 | 7.7e-09 | 35.4 | 1.7 | 6400.0 | -2.8 |
| pfu_aug2.0_106.1_20249.t1 | 5 | 3 | DUF2754 | 79 | 104 | 7.7e-09 | 35.4 | 1.2e-07 | 0.00046 | 20.1 |
| pfu_aug2.0_106.1_20249.t1 | 5 | 4 | DUF2754 | 128 | 162 | 7.7e-09 | 35.4 | 8.5e-09 | 3.1e-05 | 23.9 |
| pfu_aug2.0_106.1_20249.t1 | 2 | 2 | Tetraspannin | 137 | 293 | 0.0 | 162.7 | 1.3e-24 | 4.7e-21 | 75.0 |
| pfu_aug2.0_106.1_20249.t1 | 5 | 5 | DUF2754 | 187 | 196 | 7.7e-09 | 35.4 | 2.6 | 9500.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20249.t1 | gi|524879669|ref|XP_005096507.1| | PREDICTED: tetraspanin-17-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20249.t1 | gi|676480559|ref|XP_009062099.1| | hypothetical protein LOTGIDRAFT_205798 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_106.1_20249.t1 | gi|746870650|ref|XP_011066515.1| | PREDICTED: tetraspanin-5 isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_106.1_20249.t1 | gi|759047838|ref|XP_011332951.1| | PREDICTED: tetraspanin-5 isoform X4 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20249.t1 atgaagtacttgatttttggtttcaacgtactattttggttaattggagcgggtatctgtggtataggactatgggcatg gatggagaaggacacgttccagaatatcggcaagttgacaaatgttaccctggatccagccctgttctttattctcagtg gtggagtcatgtttgtcatagctttctgtggatgtattggtgctctcagggaaaacacttgtctattaacccttttttgt gttacacttggtctgatatttgtgatggagcttgtgattggaatcctgggatttatctataaagattgggtgaagaatca aattgaatcccaggtgaagaatatgattgtaaactatcgtgaagatgttgatctacaaaaccttatcgactgggtccaac aagactggttttgtgtaacactgggtcttatatttgtgatggagcttgtgattggaatcctgggatttatctataaagat tgggtgaagaatcaaattgaatcccaggtgaagaatatgattgtaaactatcgtgaagatgttgatctacaaaaccttat agactgggtccaacaagactggttgtattgttgtggagtaacaagttacaaggactggggacttaacagatactttaact gtgcttcacctggtgtggagaaatgtggagtacccttctcatgttgtaaacccacaaatgatataatcaaaaatcgacag tgtggatatggaatgataaacgacaccagcagagacacaaagatctacacacagggttgtataccagccggggagaaatg gttagagtctaaccttataccagtcgcctctgtcatggttggcattgcagttctacagattttaggaatatgttttgctc acaacttgaagagtgatgtaaatgctcaaaaagccaagtggaattattga |
|
Protein
| Protein ID | pfu_aug2.0_106.1_20249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20249.t1 MKYLIFGFNVLFWLIGAGICGIGLWAWMEKDTFQNIGKLTNVTLDPALFFILSGGVMFVIAFCGCIGALRENTCLLTLFC VTLGLIFVMELVIGILGFIYKDWVKNQIESQVKNMIVNYREDVDLQNLIDWVQQDWFCVTLGLIFVMELVIGILGFIYKD WVKNQIESQVKNMIVNYREDVDLQNLIDWVQQDWLYCCGVTSYKDWGLNRYFNCASPGVEKCGVPFSCCKPTNDIIKNRQ CGYGMINDTSRDTKIYTQGCIPAGEKWLESNLIPVASVMVGIAVLQILGICFAHNLKSDVNAQKAKWNY |
|