Gene
| Gene Model ID | pfu_aug2.0_106.1_20253 |
|---|---|
| Locus | scaffold106.1 : 358834 ... 386566 : - |
| To GenomeBrowser | scaffold106.1:358834..386566 |
| Genes list of scaffold | scaffold106.1 |
| Synonym | pfu_aug1.0_5066.1_23724 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dnaj homolog subfamily c member 21 | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_106.1_20253.t2 | 2 | 1 | zf-met | 2 | 11 | 1.7e-07 | 31.2 | 0.082 | 300.0 | 1.8 |
| pfu_aug2.0_106.1_20253.t2 | 3 | 1 | DnaJ | 10 | 72 | 3.2e-26 | 90.8 | 8.6e-30 | 3.2e-26 | 90.8 |
| pfu_aug2.0_106.1_20253.t2 | 3 | 2 | DnaJ | 203 | 213 | 3.2e-26 | 90.8 | 1.5 | 5500.0 | -2.9 |
| pfu_aug2.0_106.1_20253.t2 | 3 | 3 | DnaJ | 227 | 233 | 3.2e-26 | 90.8 | 2.8 | 11000.0 | -3.8 |
| pfu_aug2.0_106.1_20253.t2 | 1 | 1 | zf-C2H2_jaz | 306 | 330 | 5.2e-10 | 39.1 | 3.4e-13 | 1.3e-09 | 37.9 |
| pfu_aug2.0_106.1_20253.t2 | 2 | 2 | zf-met | 306 | 329 | 1.7e-07 | 31.2 | 5.7e-11 | 2.1e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_106.1_20253.t2 | gi|524907253|ref|XP_005108749.1| | PREDICTED: dnaJ homolog subfamily C member 21-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_106.1_20253.t2 | gi|260798939|ref|XP_002594457.1| | hypothetical protein BRAFLDRAFT_277565 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_106.1_20253.t2 | gi|555999572|ref|XP_005911486.1| | PREDICTED: dnaJ homolog subfamily C member 21, partial [Bos mutus] | 0.0 |
| pfu_aug2.0_106.1_20253.t2 | gi|640808658|ref|XP_008060862.1| | PREDICTED: dnaJ homolog subfamily C member 21 [Tarsius syrichta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_106.1_20253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20253.t1 atggcctccaaaagttccatgaaatgtcattatgaagtgctcaatgtcagcagagatgccaattcagatgaactgaagaa atcttacaggaaactagctctaaaatggcatccagacaaaaatcctgatcaaatagaagaatgcacaaggcagttcagaa tcatacagcaggcctatgatgtgttaagtgatccccaggaaagggcctggtatgacaaacatagagaggctattctcagg ggaggaatgggtcatggggaatcatatacagatgatagcttggatgtctttcagtatttcaatacttcctgttttatggg ttatggcgatgatgaagaaggtttttatgctgtctaccgagaagttttcaacgtaatagatcatgaggatgatgaattca gagatgatgatgacgaggaatttaaagctcccgaatttggacagtcagacagttcttatgaagaggtagtaaaaccattt tatgattactgggagcactacttcactgtaaaatcttatgtatgggtagaaaaatatgacactcgtgaagctcccgatcg taggacacgtagagctatggaggctgaaaataagaagttaagggacgctgctaaaaaagaaagaaatgaagaagtcagag cattggttggttttatcaagaaacgtgacaagagagtccaagcctataggaaaaagatggaggaaagaaatgaagaaatt gcaagaaaagcaaaagagaaacaagaccagcataggagagaattactgaaacaagcagagaattacgaggataaaggatg gtcggccatgacagagctagaggaagatttacagaagttagaatctcagtttacctcatcagaagaagaagaatgtggtg aagaggaggatgaagaggagatttatgatgaaccattctgtgtggcatgtaataaattctttaaaagtgaaaaagcgctc tcaaatcatgaacgttccaagaagcataaagagaatgtggcattgttaaaggagcagatgcaggaagaagatgaggacct ggtagaatcagggggaggcactgaaaatcctcagaacgacgtgaattccgaggaagacagtgccgatcaggaaactcaac caaccaaacaaaaattatccaaaaaacagaagaaaaagagaaaacaacagaagctacaggaggtagatttgttcttactt aataagtcaagaaaagcaagaagaaaagagaaagatcaacaaaaactggattctacccagtcatctacctcagaaaatgt ttctcataaagacaatgcagctgtaactgaaacaagcgaaaattcccaagttcccaactgtgataaaactgacaatactg atagttcagaaccatgtgctgaacaggaagtgacatcagagacagggaattgtgggcaaggtgatgggaaatctcagaag gaatcctataataagccaaataccgcaaagtcaaataaggatctcaagtgcaatgtatgtcagaaaggatttccgaccag aaataaactgtttgaccatatcaaacaagaaggacacgccattaggttagatgtgccacaatctctgttagacaatgtca ataagaaaggcaagaaaaaaggaaagagataa |
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| Transcript ID | pfu_aug2.0_106.1_20253.t2 |
| Definition | - |
>pfu_aug2.0_106.1_20253.t2 atggcctccaaaagttccatgaaatgtcattatgaagtgctcaatgtcagcagagatgccaattcagatgaactgaagaa atcttacaggaaactagctctaaaatggcatccagacaaaaatcctgatcaaatagaagaatgcacaaggcagttcagaa tcatacagcaggcctatgatgtgttaagtgatccccaggaaagggcctggtatgacaaacatagagaggctattctcagg ggaggaatgggtcatggggaatcatatacagatgatagcttggatgtctttcagtatttcaatacttcctgttttatggg ttatggcgatgatgaagaaggtttttatgctgtctaccgagaagttttcaacgtaatagatcatgaggatgatgaattca gagatgatgatgacgaggaatttaaagctcccgaatttggacagtcagacagttcttatgaagaggtagtaaaaccattt tatgattactgggagcactacttcactgtaaaatcttatgtatgggtagaaaaatatgacactcgtgaagctcccgatcg taggacacgtagagctatggaggctgaaaataagaagttaagggacgctgctaaaaaagaaagaaatgaagaagtcagag cattggttggttttatcaagaaacgtgacaagagagtccaagcctataggaaaaagatggaggaaagaaatgaagaaatt gcaagaaaagcaaaagagaaacaagaccagcataggagagaattactgaaacaagcagagaattacgaggataaaggatg gtcggccatgacagagctagaggaagatttacagaagttagaatctcagtttacctcatcagaagaagaagaatgtggtg aagaggaggatgaagaggagatttatgatgaaccattctgtgtggcatgtaataaattctttaaaagtgaaaaagcgctc tcaaatcatgaacgttccaagaagcataaagagaatgtggcattgttaaaggagcagatgcaggaagaagatgaggacct ggtagaatcagggggaggcactgaaaatcctcagaacgacgtgaattccgaggaagacagtgccgatcaggaaactcaac caaccaaacaaaaagtgtcacatatgtgcgaaacaaaccatgccgtgatgcagcatcctttgaaggtcagtttacgttta aaattgaaggtcataagctga |
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Protein
| Protein ID | pfu_aug2.0_106.1_20253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_106.1_20253.t1 MASKSSMKCHYEVLNVSRDANSDELKKSYRKLALKWHPDKNPDQIEECTRQFRIIQQAYDVLSDPQERAWYDKHREAILR GGMGHGESYTDDSLDVFQYFNTSCFMGYGDDEEGFYAVYREVFNVIDHEDDEFRDDDDEEFKAPEFGQSDSSYEEVVKPF YDYWEHYFTVKSYVWVEKYDTREAPDRRTRRAMEAENKKLRDAAKKERNEEVRALVGFIKKRDKRVQAYRKKMEERNEEI ARKAKEKQDQHRRELLKQAENYEDKGWSAMTELEEDLQKLESQFTSSEEEECGEEEDEEEIYDEPFCVACNKFFKSEKAL SNHERSKKHKENVALLKEQMQEEDEDLVESGGGTENPQNDVNSEEDSADQETQPTKQKLSKKQKKKRKQQKLQEVDLFLL NKSRKARRKEKDQQKLDSTQSSTSENVSHKDNAAVTETSENSQVPNCDKTDNTDSSEPCAEQEVTSETGNCGQGDGKSQK ESYNKPNTAKSNKDLKCNVCQKGFPTRNKLFDHIKQEGHAIRLDVPQSLLDNVNKKGKKKGKR |
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| Protein ID | pfu_aug2.0_106.1_20253.t2 |
| Definition | - |
>pfu_aug2.0_106.1_20253.t2 MASKSSMKCHYEVLNVSRDANSDELKKSYRKLALKWHPDKNPDQIEECTRQFRIIQQAYDVLSDPQERAWYDKHREAILR GGMGHGESYTDDSLDVFQYFNTSCFMGYGDDEEGFYAVYREVFNVIDHEDDEFRDDDDEEFKAPEFGQSDSSYEEVVKPF YDYWEHYFTVKSYVWVEKYDTREAPDRRTRRAMEAENKKLRDAAKKERNEEVRALVGFIKKRDKRVQAYRKKMEERNEEI ARKAKEKQDQHRRELLKQAENYEDKGWSAMTELEEDLQKLESQFTSSEEEECGEEEDEEEIYDEPFCVACNKFFKSEKAL SNHERSKKHKENVALLKEQMQEEDEDLVESGGGTENPQNDVNSEEDSADQETQPTKQKVSHMCETNHAVMQHPLKVSLRL KLKVIS |
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