Gene
| Gene Model ID | pfu_aug2.0_1060.1_01352 |
|---|---|
| Locus | scaffold1060.1 : 2709 ... 39405 : - |
| To GenomeBrowser | scaffold1060.1:2709..39405 |
| Genes list of scaffold | scaffold1060.1 |
| Synonym | pfu_aug1.0_6975.1_52857 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1060.1_01352.t1 | 3 | 1 | Helitron_like_N | 726 | 745 | 3.7e-12 | 46.3 | 0.0058 | 86.0 | 2.7 |
| pfu_aug2.0_1060.1_01352.t1 | 3 | 2 | Helitron_like_N | 740 | 802 | 3.7e-12 | 46.3 | 1.3e-15 | 1.9e-11 | 44.0 |
| pfu_aug2.0_1060.1_01352.t1 | 3 | 3 | Helitron_like_N | 899 | 937 | 3.7e-12 | 46.3 | 0.39 | 5800.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1060.1_01352.t1 | gi|585709631|ref|XP_006824386.1| | PREDICTED: uncharacterized protein LOC100379079 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1060.1_01352.t1 | gi|528481343|ref|XP_005172123.1| | PREDICTED: uncharacterized protein LOC101882198 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1060.1_01352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1060.1_01352.t1 atgcgctggtacaaggctgtagattcgtccagtgccaagaccaagtgtccgtctggtgacagcggatcatatccatggaa acaagtactcctcagggtcctcttcaagaattatgtgtttgacctgatctctttaaatggaacataccagaagccacaca ctatccacgtctttgttgcaaaggcaaaggagctgaatctggaccttgtccagtttcctcgtccagtggtgatatatgaa gtaagagttatcccccttcagaccagagtagaggcagatgtgccgggaggagtcagattaggagctaccaatccttcagc cttcaaattagagttgtttgtcaacaatctcaacaagcctaatgcagctacgtttgaaaaacttggctccaatttgcccc aggcacctgcagttctgtctgaactttggagacgacccctcaacccgccaatatacaaaccgaaggtcacatgcctcagt tttttgttcaggcagttctacgtcgttaaaatgccggaatcatttaaatcttgcataaaatgcaaaggacagatgaatat tctggacgatcacgccgagtgttataagcagagagtgtgcaatgcggattttccgtgcaacatatgtaggcagtggtcgg aggaaaatagaaatatcatcgagaaaatggttgacaaggcgaaggcaaaacgtgttcctacggcgacacttacatctgag acagattcggttccttctgaggggaatccgacttccttgccacaagcttcctctgtgggaagcccggcttcacatccagc tccctttgcggggatacaatatgtgcaaaacgttccatcgccgccattcgcattagctcccgtttcctctgactggcaaa gacaacaagaggaactgataaatcgtcttctcgacgctcgttttgggaagcaaatggatagcaacaattatgctccttcc acctctgagaagcagagatataggagattcgatagctttgcgtcctctcttgaccaggacaatttacagagcgaatctct ggatgaaagggacaatttggtccggtctgatgacatattggacattgattcgagatcacagatttcagactcgagatctc atatatcagacactagatctcatctatcggatacatctttggaccaggagtctgttgcagctacatctgtgaagggtcac tctgattttcagaaattcatgatgaaagtggctaacacgttgcacatcgaagcagagaatattacctccgatcggcagaa tataaatcatacgtctctaatcgatattctgctccccgtacccggagccgtaagcttggaattgctacgctctggcgttc agttggacggggatttacgcatatgcgtttcccccacccatattgatcccaaggagacttcagagaatgaaacaggagat gtgtacactcctactgagtgcgccgctatctccgaggcagtcgtgatatccaacacttctaagtctgctagtggacatac caatgatgttacctttaagagaggatctaataagtcaaagaaagggtcaaataaaacatccagaccctcaaatgaagtct atagatcagagggtgtgaaacttgatacttcttggcagcattcaacaaatgcatcaggacttaaagaagaggaatcaaag gagtgtgaccatgtagaagatccatggaatgaagtacctgaagaggacttacgatgtggaaccttagacacattgcttca tcctcaagatgtttcagtagagtcaaaagaagtcctctcatttgcaccaggagaaggaaattctcctttgaattcatttt ttgacaattatgcagaggagataagtttccccactatattttgtggacaaacaggacaaacaagaatggagaacaaaatg agagaagttgcaaatctttcatatggagatatttgtaaagcagaattaggcaatgctgacagaagagcggcaggtcatat tcaaaacattttcttcaaattcaaaaaaatacaagctaagcacatactggacaaggctaacatatgtaaaaggaaagcca aaaaaagtaatgaactctatgcttggatattaaaaaatgttgaaaatgtagagcaattgtgcagacatgacgatggattc cgatttttttgtgatttacgtggttccccaccatattgggagcaggctaaaaaagacatctttgcacttgctgaattact tcgaaatgatcctgtggcatctgcaagacactttgatcatcaagttcaaattttcatcatcaaagttctaaaaagtgatc tcaacccaataggaaaagtagtggaatttttctacaaagtggaatttcaaatgaggggctcgcctcacatacatatgatt atttgggcgaaggatgctcctaagctgcaagatggcaatgaatctgaaataactgactttatagatcagtacgttacttg tgctagagatgctgaaatagagaaacttgtggagtatcaacaacgctctcatggaagaacttgtaaaaagcgcaacaaaa atgaatgccgttttaactttccgcaaccaccaatgacaaatacttgtattttatacccccttgatgaagagatggatata aaggataaacaagctcacaaagaaaactggattaaggtcaggaaaactttggataagatgaatcaagtcagttacatctc caaagctcaacgagggatgagcaatcttctcctcaatgccacaaaggaagcaagggaaggaaatatggatctccaaaaac aagttgaatctattggtgacaaatttcttactcatgtggaagtttccgcacaagaggctgtttatttcattctgcaaatg ccattgcggaaatcttccagggaagttatattcatagatacagcaccagaagaagaaagagtagttttattaaagagttc agaagaaattaaaaatcttcctgacgattcaaaagacattgcagaatccaacaacataaagcgttacatagaaagaccgc cttctgcagaaaatttgttcatcgcagattacacatctttatacagagccactggaacagtctctgaaggcattaaattg aagaaacggcaacatcaagctgtaattcgatgtgttgggtatcatgaagaaaaggattctgagaatttctataggaagtg cttatttttgtatcatccatggagagtagaaaaagagataattgaaaacaggggaacatacaaagaacgattttatgaca ttttgaagtgttcaaacatagctgagaagatggaggaatataatcatacatggaattatctttattatgctttagagaag cttagaaatgctgaagatgatggtttatttgaagaccaatgggacttacttgcgccgtgtacagaagctttagagaaaga agacgaagaagaggcatccaaaataatgaccgaatcaagaagaaatgaaaatgacattcatgactattctacatcagttt tctctgatttaccacaaggtgacacacagcaatgtgatataatcctcaattacatggacgatgataaataccgagagcta gtgagataa |
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Protein
| Protein ID | pfu_aug2.0_1060.1_01352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1060.1_01352.t1 MRWYKAVDSSSAKTKCPSGDSGSYPWKQVLLRVLFKNYVFDLISLNGTYQKPHTIHVFVAKAKELNLDLVQFPRPVVIYE VRVIPLQTRVEADVPGGVRLGATNPSAFKLELFVNNLNKPNAATFEKLGSNLPQAPAVLSELWRRPLNPPIYKPKVTCLS FLFRQFYVVKMPESFKSCIKCKGQMNILDDHAECYKQRVCNADFPCNICRQWSEENRNIIEKMVDKAKAKRVPTATLTSE TDSVPSEGNPTSLPQASSVGSPASHPAPFAGIQYVQNVPSPPFALAPVSSDWQRQQEELINRLLDARFGKQMDSNNYAPS TSEKQRYRRFDSFASSLDQDNLQSESLDERDNLVRSDDILDIDSRSQISDSRSHISDTRSHLSDTSLDQESVAATSVKGH SDFQKFMMKVANTLHIEAENITSDRQNINHTSLIDILLPVPGAVSLELLRSGVQLDGDLRICVSPTHIDPKETSENETGD VYTPTECAAISEAVVISNTSKSASGHTNDVTFKRGSNKSKKGSNKTSRPSNEVYRSEGVKLDTSWQHSTNASGLKEEESK ECDHVEDPWNEVPEEDLRCGTLDTLLHPQDVSVESKEVLSFAPGEGNSPLNSFFDNYAEEISFPTIFCGQTGQTRMENKM REVANLSYGDICKAELGNADRRAAGHIQNIFFKFKKIQAKHILDKANICKRKAKKSNELYAWILKNVENVEQLCRHDDGF RFFCDLRGSPPYWEQAKKDIFALAELLRNDPVASARHFDHQVQIFIIKVLKSDLNPIGKVVEFFYKVEFQMRGSPHIHMI IWAKDAPKLQDGNESEITDFIDQYVTCARDAEIEKLVEYQQRSHGRTCKKRNKNECRFNFPQPPMTNTCILYPLDEEMDI KDKQAHKENWIKVRKTLDKMNQVSYISKAQRGMSNLLLNATKEAREGNMDLQKQVESIGDKFLTHVEVSAQEAVYFILQM PLRKSSREVIFIDTAPEEERVVLLKSSEEIKNLPDDSKDIAESNNIKRYIERPPSAENLFIADYTSLYRATGTVSEGIKL KKRQHQAVIRCVGYHEEKDSENFYRKCLFLYHPWRVEKEIIENRGTYKERFYDILKCSNIAEKMEEYNHTWNYLYYALEK LRNAEDDGLFEDQWDLLAPCTEALEKEDEEEASKIMTESRRNENDIHDYSTSVFSDLPQGDTQQCDIILNYMDDDKYREL VR |
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