Gene
| Gene Model ID | pfu_aug2.0_1060.1_01354 |
|---|---|
| Locus | scaffold1060.1 : 58796 ... 76232 : + |
| To GenomeBrowser | scaffold1060.1:58796..76232 |
| Genes list of scaffold | scaffold1060.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein-sorting-associated protein 36 | GO:0005764 GO:0005770 GO:0006351 GO:0016197 GO:0032266 GO:0043130 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1060.1_01354.t1 | 1 | 1 | Vps36_ESCRT-II | 6 | 87 | 9.9e-16 | 57.3 | 6.0e-19 | 1.8e-15 | 56.5 |
| pfu_aug2.0_1060.1_01354.t1 | 1 | 1 | EAP30 | 149 | 322 | 0.0 | 166.2 | 0.0 | 0.0 | 165.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1060.1_01354.t1 | gi|524891490|ref|XP_005102278.1| | PREDICTED: vacuolar protein-sorting-associated protein 36-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1060.1_01354.t1 | gi|676464125|ref|XP_009056821.1| | hypothetical protein LOTGIDRAFT_202604 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1060.1_01354.t1 | gi|260827841|ref|XP_002608872.1| | hypothetical protein BRAFLDRAFT_116073 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1060.1_01354.t1 | gi|30794416|ref|NP_081614.1| | vacuolar protein-sorting-associated protein 36 [Mus musculus] | 0.0 |
| pfu_aug2.0_1060.1_01354.t1 | gi|395859027|ref|XP_003801848.1| | PREDICTED: vacuolar protein-sorting-associated protein 36 [Otolemur garnettii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1060.1_01354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1060.1_01354.t1 atggataggtttgattggggagatgaaaatcttgtctcgggcgagtcccttgtaaattatcaggcgggtgtagctgttta tgatggaaatgacaagacaccatttgaacatgggacattaacattaacaactcatagaatcttgtggaaagattttaaag acagaaataccttgctttccttgcctctggcactggtggtctttattgaggagcagccgtcaggatttgccaaaagtgca aagatcatcgtacacctccaggcagctccgacaaacaaatctcccggccctgttacccacagtcctaatcagtttgtcag gttctcattcagagagtccggagagaaagagtttttcagagattttaatgaacaactacaacacagaaaatgggagcagg tgattccctcatcgacccctgctggtcagggtgccagacatagggctggtatcatgggaatagaaagaacaatccagcag cgaaacaaaactacggataaaaatatcacccaggctttccaagatctcagtaagctgatggaaaaggccaaagatatggt atcaatatctaagtcaatagccacgaaaataaaagaaaaacaaggggacataactgaggatgagaccgtaaaattcaaag cctacctgttaagtatgggtatcccagaccctgtaactcgagaaacgcatggaactggagacaagtattatacagaactg gctcgtcaactgtctaatgtactggaaggtccactaaaggagtgcggaggtataatgactctaacagatgtttactgccg tgtcaacagagcaaggggaatggaattactttctccagaagacttactaaatgcctgtgaaatgtttgaaattttgcgtc tgccagtcagattgaaaacatttgacagtggagttaaggtgttacagttacaaacacatgatgaagaacaagtcatacat acaaccactgatatggtccaacttctttctccaattcaattatgtatgaattcttttacagattactgttaa |
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Protein
| Protein ID | pfu_aug2.0_1060.1_01354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1060.1_01354.t1 MDRFDWGDENLVSGESLVNYQAGVAVYDGNDKTPFEHGTLTLTTHRILWKDFKDRNTLLSLPLALVVFIEEQPSGFAKSA KIIVHLQAAPTNKSPGPVTHSPNQFVRFSFRESGEKEFFRDFNEQLQHRKWEQVIPSSTPAGQGARHRAGIMGIERTIQQ RNKTTDKNITQAFQDLSKLMEKAKDMVSISKSIATKIKEKQGDITEDETVKFKAYLLSMGIPDPVTRETHGTGDKYYTEL ARQLSNVLEGPLKECGGIMTLTDVYCRVNRARGMELLSPEDLLNACEMFEILRLPVRLKTFDSGVKVLQLQTHDEEQVIH TTTDMVQLLSPIQLCMNSFTDYC |
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