Gene
| Gene Model ID | pfu_aug2.0_1061.1_04797 |
|---|---|
| Locus | scaffold1061.1 : 1 ... 65415 : - |
| To GenomeBrowser | scaffold1061.1:1..65415 |
| Genes list of scaffold | scaffold1061.1 |
| Synonym | pfu_aug1.0_547.1_00386 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1061.1_04797.t5 | 2 | 1 | VWA_N | 94 | 119 | 5.6e-29 | 101.2 | 5.2 | 9600.0 | -2.9 |
| pfu_aug2.0_1061.1_04797.t5 | 3 | 1 | OTU | 133 | 240 | 1.3e-10 | 41.8 | 1.7e-12 | 3.2e-09 | 37.4 |
| pfu_aug2.0_1061.1_04797.t5 | 3 | 2 | OTU | 311 | 360 | 1.3e-10 | 41.8 | 0.51 | 950.0 | 0.3 |
| pfu_aug2.0_1061.1_04797.t5 | 2 | 2 | VWA_N | 322 | 408 | 5.6e-29 | 101.2 | 3.0e-32 | 5.6e-29 | 101.2 |
| pfu_aug2.0_1061.1_04797.t5 | 1 | 1 | VWA_2 | 435 | 609 | 3.6e-12 | 46.7 | 3.4e-15 | 6.3e-12 | 45.9 |
| pfu_aug2.0_1061.1_04797.t5 | 1 | 1 | VWA | 435 | 599 | 5.4e-12 | 45.7 | 6.5e-15 | 1.2e-11 | 44.6 |
| pfu_aug2.0_1061.1_04797.t5 | 1 | 1 | VWA_3 | 436 | 607 | 5.8e-11 | 42.3 | 5.0e-14 | 9.2e-11 | 41.6 |
| pfu_aug2.0_1061.1_04797.t5 | 3 | 3 | OTU | 515 | 568 | 1.3e-10 | 41.8 | 1.8 | 3300.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1061.1_04797.t5 | gi|677981469|ref|XP_009073299.1| | PREDICTED: voltage-dependent calcium channel subunit alpha-2/delta-2-like, partial [Acanthisitta chloris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1061.1_04797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1061.1_04797.t1 atggataaggacgaattgtatatgaaaagactaaaagagaaaagagcaaggtatttatcccatgaaaattttctttacac atgcattgcgcggtcgttagttcctggtggctttgactacaaatggagcagtaatattgagatgtcagaggaaattatgg agaaatgtaataagattaaagaagacgcgtcccttaaattaatggaattaactttgacagcctgtaaacacaaagtttcg gacctgacagatgaaatcaaaattaaagaaaaatggcatgatacggaagctataaaacaaaccgacagggatgaggaagc tgaaatgagacgtatgaaaaaaattaaagacaaaaaactggaaaagtattcatcacaggaaacggaagtgtgtgtgactg gagacgggaactgtttttatcggtgtctgagtgtttatttccatggtgacgagacactacacggaactattcgaaaagat ttaatcaactttatgagcctaaataccgagaaattccaaactttcatagatgggccagttggtagacacctcctacaaca gacgtatacagacggaaggacagagtcatgggcgacagaagcagaaatcatggcggcttcagcattgtatggggtatcaa ctcgtatcatgagttctaatattgatgataaatttgttggcgtcaccattgatacttcgatggtgagggagcattggaag cgatttgatttcaaattgtcaagttgggctgtaaaacttagacaaagactgtaccaatacaaagaaatagctagcatagc caatcaaaataattattatatggagttaaagaaatatttggatagcaatgccattcgaattgagaccattgatggagaag aattgctgaatgagatgaaaggcaaactagagaccatgttgtacaataagatggtcgctttggaggaaactagagttcag tactacaacactaaggatccatccattctagaatttctcgagccagcagaacgttttaacaatttgaaaatcaacgctac attttcggcagttcatataccagtcgagatttacgaaggagatatagacatcttaaatgggctgaagtggaccgacaaat tggatgaattatttaagaagaactatgacaatgatgatgagatactatggcagtactttggaagtcagacaggatttatg agaacctttccagcaagtaaatggaaagagccacaaaatggtgtcgacctgtatgatgttaggagaagaccatggtatac ccagggctccagttctcctaaggacatgtttatcctgattgatacgagtggaagtgtacatggccagtctttacagctta tgaaagtggcagtaaagtctatacttgacacgttaggagaaaatgactttgttatgattgccaattttagcaccagtaaa cctgatataggtgttcaaccagtcggctgtttcggtacatttgttcaggccaactacaggaacaaacagattttatctca tgatgtagacaacttaatggcacagaaagaatctagtttctctgcagcctttgaatatgcttttcagcaatttgacaagt ttgagaacacatcacaggagggtgtaggagcccgctgtaatcgtatcataatgttacttaccgatggtggaacagatacg gcagaagacatctttaacaagtacaactggaaacgtccaaaatctaaacaagttcgagttttcacttatgctgtaggaca gaacccgtccccgaccagtgatgttaaatggatggcttgtgccaacagaggaaaatattcagagattccagcgatgggag caattagagctagagtacaggaatatgtcccggtcctagctagaccagcagctataaagaataagaaagagttcaaatgg ggcaatatttacatagatacactgggcctaggaatgatgaccaccgtgactttacctctttacaacttgacagaggggtc tgcaaaccagactatactgggagttatgggtatagacgtgaccacagcgaagatggagaagcactctcccacgtggaagc tgggaccaagtggttactcatttgcactgaatactaatggttatctgatatttcacccaaagttagttgtacagggaact caggatgacccaccaagcatggatttccttgatgtagaaattgagaccccagaaaaagttcag |
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| Transcript ID | pfu_aug2.0_1061.1_04797.t2 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t2 atggataaggacgaattgtatatgaaaagactaaaagagaaaagagcaaggtatttatcccatgaaaattttctttacac atgcattgcgcggtcgttagttcctggtggctttgactacaaatggagcagtaatattgagatgtcagaggaaattatgg agaaatgtaataagattaaagaagacgcgtcccttaaattaatggaattaactttgacagcctgtaaacacaaagtttcg gacctgacagatgaaatcaaaattaaagaaaaatggcatgatacggaagctataaaacaaaccgacagggatgaggaagc tgaaatgagacgtatgaaaaaaattaaagacaaaaaactggaaaagtattcatcacaggaaacggaagtgtgtgtgactg gagacgggaactgtttttatcggtgtctgagtgtttatttccatggtgacgagacactacacggaactattcgaaaagat ttaatcaactttatgagcctaaataccgagaaattccaaactttcatagatgggccagttggtagacacctcctacaaca gacgtatacagacggaaggacagagtcatgggcgacagaagcagaaatcatggcggcttcagcattgtatggggtatcaa ctcgtatcatgagttctaatattgatgataaatttgttggcgtcaccattgatacttcgatggtgagggagcattggaag cgatttgatttcaaattgtcaagttgggctgtaaaacttagacaaagactgtaccaatacaaagaaatagctagcatagc caatcaaaataattattatatggagttaaagaaatatttggatagcaatgccattcgaattgagaccattgatggagaag aattgctgaatgagatgaaaggcaaactagagaccatgttgtacaataagatggtcgctttggaggaaactagagttcag tactacaacactaaggatccatccattctagaatttctcgagccagcagaacgttttaacaatttgaaaatcaacgctac attttcggcagttcatataccagtcgagatttacgaaggagatatagacatcttaaatgggctgaagtggaccgacaaat tggatgaattatttaagaagaactatgacaatgatgatgagatactatggcagtactttggaagtcagacaggatttatg agaacctttccagcaagtaaatggaaagagccacaaaatggtgtcgacctgtatgatgttaggagaagaccatggtatac ccagggctccagttctcctaaggacatgtttatcctgattgatacgagtggaagtgtacatggccagtctttacagctta tgaaagtggcagtaaagtctatacttgacacgttaggagaaaatgactttgttatgattgccaattttagcaccagtaaa cctgatataggtgttcaaccagtcggctgtttcggtacatttgttcaggccaactacaggaacaaacagattttatctca tgatgtagacaacttaatggcacagaaagaatctagtttctctgcagcctttgaatatgcttttcagcaatttgacaagt ttgagaacacatcacaggagggtgtaggagcccgctgtaatcgtatcataatgttacttaccgatggtggaacagatacg gcagaagacatctttaacaagtacaactggaaacgtccaaaatctaaacaagttcgagttttcacttatgctgtaggaca gaacccgtccccgaccagtgatgttaaatggatggcttgtgccaacagaggaaaatattcagagattccagcgatgggag caattagagctagagtacaggatagttttgatatgttgtcagccgtcaaaggtctgctaagacctcgggagatgaaagta acatattctatggatccaagggaatatgtcccggtcctagctagaccagcagctataaagaataagaaagagttcaaatg gggcaatatttacatagatacactgggcctaggaatgatgaccaccgtgactttacctctttacaacttgacagaggggt ctgcaaaccagactatactgggagttatgggtatagacgtgaccacagcgaagatggagaagcactctcccacgtggaag ctgggaccaagtggttactcatttgcactgaatactaatggttatctgatatttcacccaaagttagttgtacagggaac tcaggatgacccaccaagcatggatttccttgatgtagaaattgagaccccagaaaaagttcag |
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| Transcript ID | pfu_aug2.0_1061.1_04797.t3 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t3 atgcttcacgtgtgttcattgcaagatagttttgatatgttgtcagccgtcaaaggtctgctaagacctcgggagatgaa agtaacatattctatggatccaaggggcctaggaatgatgaccaccgtgactttacctctttacaacttgacagaggggt ctgcaaaccagactatactgggagttatgggtatagacgtgaccacagcgaagatggagaagcactctcccacgtggaag ctgggaccaagtggttactcatttgcactgaatactaatggttatctgatatttcacccaaagttagttgtacagggaac tcaggatgacccaccaagcatggatttccttgatgtagaaattgagaccccagaaaaagttcag |
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| Transcript ID | pfu_aug2.0_1061.1_04797.t4 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t4 atgcttcacgtgtgttcattgcaagatagttttgatatgttgtcagccgtcaaaggtctgctaagacctcgggagatgaa agtaacatattctatggatccaagggaatatgtcccggtcctagctagaccagcagctataaagaataagaaagagttca aatggggcaatatttacatagatacactgggcctaggaatgatgaccaccgtgactttacctctttacaacttgacagag gggtctgcaaaccagactatactgggagttatgggtatagacgtgaccacagcgaagatggagaagcactctcccacgtg gaagctgggaccaagtggttactcatttgcactgaatactaatggttatctgatatttcacccaaagttagttgtacagg gaactcaggatgacccaccaagcatggatttccttgatgtagaaattgagaccccagaaaaagttcag |
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| Transcript ID | pfu_aug2.0_1061.1_04797.t5 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t5 atggataaggacgaattgtatatgaaaagactaaaagagaaaagagcaaggtatttatcccatgaaaattttctttacac atgcattgcgcggtcgttagttcctggtggctttgactacaaatggagcagtaatattgagatgtcagaggaaattatgg agaaatgtaataagattaaagaagacgcgtcccttaaattaatggaattaactttgacagcctgtaaacacaaagtttcg gacctgacagatgaaatcaaaattaaagaaaaatggcatgatacggaagctataaaacaaaccgacagggatgaggaagc tgaaatgagacgtatgaaaaaaattaaagacaaaaaactggaaaagtattcatcacaggaaacggaagtgtgtgtgactg gagacgggaactgtttttatcggtgtctgagtgtttatttccatggtgacgagacactacacggaactattcgaaaagat ttaatcaactttatgagcctaaataccgagaaattccaaactttcatagatgggccagttggtagacacctcctacaaca gacgtatacagacggaaggacagagtcatgggcgacagaagcagaaatcatggcggcttcagcattgtatggggtatcaa ctcgtatcatgagttctaatattgatgataaatttgttggcgtcaccattgatacttcgatggtgagggagcattggaag cgatttgatttcaaattgtcaagttgggctgtaaaacttagacaaagactgtaccaatacaaagaaatagctagcatagc caatcaaaataattattatatggagttaaagaaatatttggatagcaatgccattcgaattgagaccattgatggagaag aattgctgaatgagatgaaaggcaaactagagaccatgttgtacaataagatggtcgctttggaggaaactagagttcag tactacaacactaaggatccatccattctagaatttctcgagccagcagaacgttttaacaatttgaaaatcaacgctac attttcggcagttcatataccagtcgagatttacgaaggagatatagacatcttaaatgggctgaagtggaccgacaaat tggatgaattatttaagaagaactatgacaatgatgatgagatactatggcagtactttggaagtcagacaggatttatg agaacctttccagcaagtaaatggaaagagccacaaaatggtgtcgacctgtatgatgttaggagaagaccatggtatac ccagggctccagttctcctaaggacatgtttatcctgattgatacgagtggaagtgtacatggccagtctttacagctta tgaaagtggcagtaaagtctatacttgacacgttaggagaaaatgactttgttatgattgccaattttagcaccagtaaa cctgatataggtgttcaaccagtcggctgtttcggtacatttgttcaggccaactacaggaacaaacagattttatctca tgatgtagacaacttaatggcacagaaagaatctagtttctctgcagcctttgaatatgcttttcagcaatttgacaagt ttgagaacacatcacaggagggtgtaggagcccgctgtaatcgtatcataatgttacttaccgatggtggaacagatacg gcagaagacatctttaacaagtacaactggaaacgtccaaaatctaaacaagttcgagttttcacttatgctgtaggaca gaacccgtccccgaccagtgatgttaaatggatggcttgtgccaacagaggaaaatattcagagattccagcgatgggag caattagagctagagtacagcaaaactgcctattgatgacaattggggaattccagttagcttag |
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Protein
| Protein ID | pfu_aug2.0_1061.1_04797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1061.1_04797.t1 MDKDELYMKRLKEKRARYLSHENFLYTCIARSLVPGGFDYKWSSNIEMSEEIMEKCNKIKEDASLKLMELTLTACKHKVS DLTDEIKIKEKWHDTEAIKQTDRDEEAEMRRMKKIKDKKLEKYSSQETEVCVTGDGNCFYRCLSVYFHGDETLHGTIRKD LINFMSLNTEKFQTFIDGPVGRHLLQQTYTDGRTESWATEAEIMAASALYGVSTRIMSSNIDDKFVGVTIDTSMVREHWK RFDFKLSSWAVKLRQRLYQYKEIASIANQNNYYMELKKYLDSNAIRIETIDGEELLNEMKGKLETMLYNKMVALEETRVQ YYNTKDPSILEFLEPAERFNNLKINATFSAVHIPVEIYEGDIDILNGLKWTDKLDELFKKNYDNDDEILWQYFGSQTGFM RTFPASKWKEPQNGVDLYDVRRRPWYTQGSSSPKDMFILIDTSGSVHGQSLQLMKVAVKSILDTLGENDFVMIANFSTSK PDIGVQPVGCFGTFVQANYRNKQILSHDVDNLMAQKESSFSAAFEYAFQQFDKFENTSQEGVGARCNRIIMLLTDGGTDT AEDIFNKYNWKRPKSKQVRVFTYAVGQNPSPTSDVKWMACANRGKYSEIPAMGAIRARVQEYVPVLARPAAIKNKKEFKW GNIYIDTLGLGMMTTVTLPLYNLTEGSANQTILGVMGIDVTTAKMEKHSPTWKLGPSGYSFALNTNGYLIFHPKLVVQGT QDDPPSMDFLDVEIETPEKVQ |
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| Protein ID | pfu_aug2.0_1061.1_04797.t2 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t2 MDKDELYMKRLKEKRARYLSHENFLYTCIARSLVPGGFDYKWSSNIEMSEEIMEKCNKIKEDASLKLMELTLTACKHKVS DLTDEIKIKEKWHDTEAIKQTDRDEEAEMRRMKKIKDKKLEKYSSQETEVCVTGDGNCFYRCLSVYFHGDETLHGTIRKD LINFMSLNTEKFQTFIDGPVGRHLLQQTYTDGRTESWATEAEIMAASALYGVSTRIMSSNIDDKFVGVTIDTSMVREHWK RFDFKLSSWAVKLRQRLYQYKEIASIANQNNYYMELKKYLDSNAIRIETIDGEELLNEMKGKLETMLYNKMVALEETRVQ YYNTKDPSILEFLEPAERFNNLKINATFSAVHIPVEIYEGDIDILNGLKWTDKLDELFKKNYDNDDEILWQYFGSQTGFM RTFPASKWKEPQNGVDLYDVRRRPWYTQGSSSPKDMFILIDTSGSVHGQSLQLMKVAVKSILDTLGENDFVMIANFSTSK PDIGVQPVGCFGTFVQANYRNKQILSHDVDNLMAQKESSFSAAFEYAFQQFDKFENTSQEGVGARCNRIIMLLTDGGTDT AEDIFNKYNWKRPKSKQVRVFTYAVGQNPSPTSDVKWMACANRGKYSEIPAMGAIRARVQDSFDMLSAVKGLLRPREMKV TYSMDPREYVPVLARPAAIKNKKEFKWGNIYIDTLGLGMMTTVTLPLYNLTEGSANQTILGVMGIDVTTAKMEKHSPTWK LGPSGYSFALNTNGYLIFHPKLVVQGTQDDPPSMDFLDVEIETPEKVQ |
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| Protein ID | pfu_aug2.0_1061.1_04797.t3 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t3 MLHVCSLQDSFDMLSAVKGLLRPREMKVTYSMDPRGLGMMTTVTLPLYNLTEGSANQTILGVMGIDVTTAKMEKHSPTWK LGPSGYSFALNTNGYLIFHPKLVVQGTQDDPPSMDFLDVEIETPEKVQ |
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| Protein ID | pfu_aug2.0_1061.1_04797.t4 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t4 MLHVCSLQDSFDMLSAVKGLLRPREMKVTYSMDPREYVPVLARPAAIKNKKEFKWGNIYIDTLGLGMMTTVTLPLYNLTE GSANQTILGVMGIDVTTAKMEKHSPTWKLGPSGYSFALNTNGYLIFHPKLVVQGTQDDPPSMDFLDVEIETPEKVQ |
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| Protein ID | pfu_aug2.0_1061.1_04797.t5 |
| Definition | - |
>pfu_aug2.0_1061.1_04797.t5 MDKDELYMKRLKEKRARYLSHENFLYTCIARSLVPGGFDYKWSSNIEMSEEIMEKCNKIKEDASLKLMELTLTACKHKVS DLTDEIKIKEKWHDTEAIKQTDRDEEAEMRRMKKIKDKKLEKYSSQETEVCVTGDGNCFYRCLSVYFHGDETLHGTIRKD LINFMSLNTEKFQTFIDGPVGRHLLQQTYTDGRTESWATEAEIMAASALYGVSTRIMSSNIDDKFVGVTIDTSMVREHWK RFDFKLSSWAVKLRQRLYQYKEIASIANQNNYYMELKKYLDSNAIRIETIDGEELLNEMKGKLETMLYNKMVALEETRVQ YYNTKDPSILEFLEPAERFNNLKINATFSAVHIPVEIYEGDIDILNGLKWTDKLDELFKKNYDNDDEILWQYFGSQTGFM RTFPASKWKEPQNGVDLYDVRRRPWYTQGSSSPKDMFILIDTSGSVHGQSLQLMKVAVKSILDTLGENDFVMIANFSTSK PDIGVQPVGCFGTFVQANYRNKQILSHDVDNLMAQKESSFSAAFEYAFQQFDKFENTSQEGVGARCNRIIMLLTDGGTDT AEDIFNKYNWKRPKSKQVRVFTYAVGQNPSPTSDVKWMACANRGKYSEIPAMGAIRARVQQNCLLMTIGEFQLA |
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