Gene
| Gene Model ID | pfu_aug2.0_1061.1_04798 |
|---|---|
| Locus | scaffold1061.1 : 103916 ... 143652 : + |
| To GenomeBrowser | scaffold1061.1:103916..143652 |
| Genes list of scaffold | scaffold1061.1 |
| Synonym | pfu_aug1.0_10086.1_31876 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh-ubiquinone oxidoreductase 75 kda mitochondrial | GO:0008137 GO:0009055 GO:0016020 GO:0042773 GO:0051536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1061.1_04798.t1 | 1 | 1 | Fer2_4 | 240 | 316 | 8.1e-19 | 67.2 | 1.4e-21 | 1.8e-18 | 66.0 |
| pfu_aug2.0_1061.1_04798.t1 | 2 | 1 | Fer2 | 245 | 305 | 6.6e-09 | 35.3 | 1.1e-11 | 1.4e-08 | 34.3 |
| pfu_aug2.0_1061.1_04798.t1 | 2 | 2 | Fer2 | 321 | 347 | 6.6e-09 | 35.3 | 0.66 | 890.0 | -0.3 |
| pfu_aug2.0_1061.1_04798.t1 | 1 | 1 | NADH-G_4Fe-4S_3 | 323 | 363 | 1.1e-17 | 63.0 | 1.8e-20 | 2.5e-17 | 61.8 |
| pfu_aug2.0_1061.1_04798.t1 | 1 | 1 | Molybdopterin | 515 | 842 | 0.0 | 233.7 | 0.0 | 0.0 | 231.1 |
| pfu_aug2.0_1061.1_04798.t1 | 1 | 1 | DUF1982 | 872 | 924 | 5.5e-14 | 52.0 | 1.1e-16 | 1.4e-13 | 50.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1061.1_04798.t1 | gi|676478154|ref|XP_009061343.1| | hypothetical protein LOTGIDRAFT_206956 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1061.1_04798.t1 | gi|291244539|ref|XP_002742151.1| | PREDICTED: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1061.1_04798.t1 | gi|260785199|ref|XP_002587650.1| | hypothetical protein BRAFLDRAFT_267717 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1061.1_04798.t1 | gi|674074242|ref|XP_008844399.1| | PREDICTED: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial [Nannospalax galili] | 0.0 |
| pfu_aug2.0_1061.1_04798.t1 | gi|658835491|ref|XP_008424873.1| | PREDICTED: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1061.1_04798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1061.1_04798.t1 atggagacaaacaacataacaataccggaaaaatatgtacaactgatgcaacgtaattgcgaagatgtttacaatacaac gaaaaactacactgaagtagcgagaattgtattcagtagctgggataaaaacggtgataatgttattagattagaagaag aattgacgtatgaagatagacatcatatgaagatggactatgaaatttcgaaagcaaggttctctcaatatgacgttaat ggagatggggatgtaacccgggaggaacttatctttaatgttgtcagctcagatgttaacaggctgttccgaaaggaatc tggcgcctgtggttgtagcacccacagcaaaaccccaaaacacccaaagcaaaacacaaagcagacaagcatagaaagag acgcgaaagggacaaggaacgtcaacgcacaacacagatacatcaaacacaaaggactacacataaaccaacgagaccaa tgggcaaccggtgccgacttaggacggccatctgccacggaaatagcagaaggaaaccacaaaccgaaggcatacaaaag aaaggaggagatctccaacaacgctcagttgcagtaccagcaaaaccagaatgagacgcaaatgagtgccgtcatgttga ggctgtggcccacatgtagggccttaagggcccagtcattaattcgctcctcgtccagatgctatgctacggagccagag aaaattgaagtttttgtagatggtaacccggtttatgtagagcctggaaccacagttctacaagcttgtgctgatggtgg tgtacagataccccgtttctgttatcatgagagactgtccattgctgggaactgtagaatgtgtctggtggaaatagaaa aatcccccaagccacaagcatcctgtgccatgccggtgatgaagggaatgagaataaagacagactccgaagtatcaaga aaagctagggagggagtgatggagtttttactggctaatcacccactagattgtccaatctgtgatcaaggaggtgaatg tgacctacaggatcagtctatggtatttggaagtgacaggagccgttttacagacattcattttgctggcaaaagggcag tagaggacaagaacattgggccacttgtcaaaactataatgacccgctgtatccactgtacgaggtgtatcaggtttgcc aatgaagtagctggcgtggaggaacttggtacaacgggtagaggtaatgagatgcaggtggggacatatgtagagaagct gttccgatcggagttatctggaaatgttattgatctctgcccagtgggagcgctcacatcaaagccttatgcatttacag ccagaccttgggaaacaaggaaaacagagagtatagatgtgatggatgccctgggcagcaatattgttgtcagcacacgt actaatgaagtgatgagaatattacccaggatgaacgaggatattaatgaagaatggatatcagataagaccagatttgc ctatgacggtttgaagaggcagaggttggcgttcccttacattaaggatgcttcagggacgttacaacaaacatcatggg aaaaagcattgatgactgcggcagaaaagatcagttcagtggagggaagtcaaattgccggtcttgccgggggactggta gatgcggaggctctgatatcgctaaaagatctactgaacaaactgggatctgaatctctgtgcaccgaagaaatattccc tatggacggagcaggaactgacttgaggtcaaactaccttcttaacaccaaaatagccggtatcgaggaggctgaccttg ttctatttataggaactaaccctaggttcgaggcacctctcttgaatgccagagttagaaagagttggattcataatgag cttgatgtagcattaattggtacccctgttgaccttacctatgactacgagcatgtgggagagtcgactgatgttataaa acagattgcccagggaaatcacccttttacaaagagactgaacagtgcgaagaagccaatggtagttgttggtagttctg ctttacagaggaaggacggtggtgccatcttggccgcagtgtctacgatcgccaacactgctcgcgtcaactcaggttgt ggtgacagctggaaagttctcaatgtccttcatagggtagccagtcaggtagcagccttggacctagggtataaggcagg agtagatgtgatcaggcagaaccctcctaaagtcctgttcctattgggagccgatgctggggttataacaaggcaagacc tacctaaggactgctttgtcatttatcaaggtcaccatggtgatgaaggagttaatatggctgatcttgtcttacctgga gtagcgtacactgagaagaatgctacctatgttaacactgagggtagagctcaacagacccgcctggctgtgtcgccacc tggtcaggcaaaggaggactggaaaatcatcagagccttatctgagatcgctggcaagaagcttccatatgataacatag cggaggtcagacatcgtttatcacaggtgtcacctaacctcaccagatacggcgacgctgaagacgctaattacttcaaa caggcacaacagctggcagggttggtgaaagggcagatggaacctacccctatgacgcctccaatgctcgaacttaaaga cttttatatgaccgattcaatcagtcgtgcttctcaaacaatggccaagtgtgtgcaggcagtacaggaatcagagaaaa atccgtatctggaagattag |
|
Protein
| Protein ID | pfu_aug2.0_1061.1_04798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1061.1_04798.t1 METNNITIPEKYVQLMQRNCEDVYNTTKNYTEVARIVFSSWDKNGDNVIRLEEELTYEDRHHMKMDYEISKARFSQYDVN GDGDVTREELIFNVVSSDVNRLFRKESGACGCSTHSKTPKHPKQNTKQTSIERDAKGTRNVNAQHRYIKHKGLHINQRDQ WATGADLGRPSATEIAEGNHKPKAYKRKEEISNNAQLQYQQNQNETQMSAVMLRLWPTCRALRAQSLIRSSSRCYATEPE KIEVFVDGNPVYVEPGTTVLQACADGGVQIPRFCYHERLSIAGNCRMCLVEIEKSPKPQASCAMPVMKGMRIKTDSEVSR KAREGVMEFLLANHPLDCPICDQGGECDLQDQSMVFGSDRSRFTDIHFAGKRAVEDKNIGPLVKTIMTRCIHCTRCIRFA NEVAGVEELGTTGRGNEMQVGTYVEKLFRSELSGNVIDLCPVGALTSKPYAFTARPWETRKTESIDVMDALGSNIVVSTR TNEVMRILPRMNEDINEEWISDKTRFAYDGLKRQRLAFPYIKDASGTLQQTSWEKALMTAAEKISSVEGSQIAGLAGGLV DAEALISLKDLLNKLGSESLCTEEIFPMDGAGTDLRSNYLLNTKIAGIEEADLVLFIGTNPRFEAPLLNARVRKSWIHNE LDVALIGTPVDLTYDYEHVGESTDVIKQIAQGNHPFTKRLNSAKKPMVVVGSSALQRKDGGAILAAVSTIANTARVNSGC GDSWKVLNVLHRVASQVAALDLGYKAGVDVIRQNPPKVLFLLGADAGVITRQDLPKDCFVIYQGHHGDEGVNMADLVLPG VAYTEKNATYVNTEGRAQQTRLAVSPPGQAKEDWKIIRALSEIAGKKLPYDNIAEVRHRLSQVSPNLTRYGDAEDANYFK QAQQLAGLVKGQMEPTPMTPPMLELKDFYMTDSISRASQTMAKCVQAVQESEKNPYLED |
|