Gene
| Gene Model ID | pfu_aug2.0_107.1_23458 |
|---|---|
| Locus | scaffold107.1 : 40814 ... 47135 : - |
| To GenomeBrowser | scaffold107.1:40814..47135 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_4397.1_16388 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fk506-binding protein | GO:0006457 GO:0016853 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23458.t1 | 2 | 1 | FKBP_C | 37 | 130 | 5.5e-26 | 90.4 | 1.4e-29 | 2.1e-25 | 88.5 |
| pfu_aug2.0_107.1_23458.t1 | 2 | 2 | FKBP_C | 276 | 295 | 5.5e-26 | 90.4 | 0.37 | 5500.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23458.t1 | gi|734636070|ref|XP_010746655.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP1A-like [Larimichthys crocea] | 2.0e-26 |
| pfu_aug2.0_107.1_23458.t1 | gi|638246194|ref|NP_001279477.1| | peptidyl-prolyl cis-trans isomerase FKBP1B-like [Callorhinchus milii] | 2.0e-26 |
| pfu_aug2.0_107.1_23458.t1 | gi|749790935|ref|XP_011148663.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP1A isoform X1 [Harpegnathos saltator] | 2.0e-26 |
| pfu_aug2.0_107.1_23458.t1 | gi|114052971|ref|NP_001040498.1| | FK506-binding protein [Bombyx mori] | 4.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23458.t1 atgaattatacgtatatttcatggactgtgtttctagtcatatttgttctttctgttgtggacagtaggatagaaatccg gacaatacgtcaaggcaatggtgtagatgtccctcaagacaacgatacagttgtggtccattatacaggatcattggtag acgggagagtgttcgattcctctcggtcaccgggacggacaccgtttgagttcatcattggacaagggacagttatcaat ggttgggacatcggctttaagcatatgagtcttggacagcgagcacaactgatcataacctatgacgacgcttatggatc agcgggaatgatgtcatcaaacccacccatctacccgtttgccaccctaatatttgatgtggagttgctccagatcaagc gcccacagcaagtaccccagaacaacttccagtctggatttgcgactggtcagcaacaatctatgggattctctaaccaa caacaaggggcagcacagattgcaacacaaggaggtggcacccagtttgccgcccagggaatgacctttggtagccaagg ccagcagacggcacaatttggtcaagttcagccgggtggtcaggtcgccggtcagtttggtacagctccagatgctagtc aacaaatgttccaacagagcggtcagtcaagtcaacagctaggtgtacaacagtcacaaggtcagcgtcagtcacaaaca gctcagtttgggtcgtctgctacggcgggacaggctcagtttggctcgcctgctgctgcagcgggacagtcacaattcgg atcgtccggtgctggtggaggggcacagtttggcacatcgggagggcagagtcagtttggattacaacagggaatgaacc aagttagcatgcaggcctcaggtcaaacggcgcaacaaggatcacaagttggatctcaacaactcggagttcaacaggga tttggtgtacaacagacacaaacagggaactttcaacagggctag |
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Protein
| Protein ID | pfu_aug2.0_107.1_23458.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23458.t1 MNYTYISWTVFLVIFVLSVVDSRIEIRTIRQGNGVDVPQDNDTVVVHYTGSLVDGRVFDSSRSPGRTPFEFIIGQGTVIN GWDIGFKHMSLGQRAQLIITYDDAYGSAGMMSSNPPIYPFATLIFDVELLQIKRPQQVPQNNFQSGFATGQQQSMGFSNQ QQGAAQIATQGGGTQFAAQGMTFGSQGQQTAQFGQVQPGGQVAGQFGTAPDASQQMFQQSGQSSQQLGVQQSQGQRQSQT AQFGSSATAGQAQFGSPAAAAGQSQFGSSGAGGGAQFGTSGGQSQFGLQQGMNQVSMQASGQTAQQGSQVGSQQLGVQQG FGVQQTQTGNFQQG |
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