Gene
| Gene Model ID | pfu_aug2.0_107.1_23459 |
|---|---|
| Locus | scaffold107.1 : 47955 ... 61925 : - |
| To GenomeBrowser | scaffold107.1:47955..61925 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peptidyl-prolyl cis-trans isomerase fkbp1a | GO:0005886 GO:0006974 GO:0016853 GO:0018208 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23459.t1 | 1 | 1 | FKBP_C | 17 | 69 | 1.8e-13 | 50.2 | 1.8e-17 | 2.6e-13 | 49.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23459.t1 | gi|669170077|ref|XP_008620387.1| | peptidyl-prolyl cis-trans isomerase FKBP1A [Saprolegnia diclina VS20] | 5.0e-11 |
| pfu_aug2.0_107.1_23459.t1 | gi|500190069|ref|WP_011863408.1| | peptidyl-prolyl cis-trans isomerase [Prochlorococcus marinus] | 1.0e-10 |
| pfu_aug2.0_107.1_23459.t1 | gi|557779230|ref|XP_005189242.1| | PREDICTED: 12 kDa FK506-binding protein [Musca domestica] | 2.0e-10 |
| pfu_aug2.0_107.1_23459.t1 | gi|391333973|ref|XP_003741384.1| | PREDICTED: 12 kDa FK506-binding protein-like [Metaseiulus occidentalis] | 2.0e-10 |
| pfu_aug2.0_107.1_23459.t1 | gi|240849035|ref|NP_001155807.1| | peptidyl-prolyl cis-trans isomerase FKBP1A-like precursor [Acyrthosiphon pisum] | 4.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23459.t1 atgaggcatgatttctatcgatatgctttctcattactgattccaggtagaacaaaaccaaggaatgaatggacagtaat tgtggactacacagggaaacttgaggacggagaagtatttgactccagcattggaaagaaaccgttcagttttattgtag gacgaggagaggtcattcctggatgggacgaagccatcaaatatcttggagcaaaggaggccgaattttttacacttggc ttgttagctctactggtctcancattacacattaacatttggtatcaaaataaaccgagggaagataaaatttgttattt tgtttttattatgagcaatgaagctatagagcgtacttttgagcttgaccttattatgtga |
|
Protein
| Protein ID | pfu_aug2.0_107.1_23459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23459.t1 MRHDFYRYAFSLLIPGRTKPRNEWTVIVDYTGKLEDGEVFDSSIGKKPFSFIVGRGEVIPGWDEAIKYLGAKEAEFFTLG LLALLVSXLHINIWYQNKPREDKICYFVFIMSNEAIERTFELDLIM |
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