Gene
| Gene Model ID | pfu_aug2.0_107.1_23461 |
|---|---|
| Locus | scaffold107.1 : 100448 ... 109935 : - |
| To GenomeBrowser | scaffold107.1:100448..109935 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_29859.1_47953 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23461.t1 | 1 | 1 | DnaJ | 27 | 88 | 3.1e-16 | 58.8 | 6.3e-20 | 4.7e-16 | 58.2 |
| pfu_aug2.0_107.1_23461.t1 | 2 | 1 | DUF2215 | 171 | 304 | 1.3e-10 | 41.1 | 0.021 | 150.0 | 1.6 |
| pfu_aug2.0_107.1_23461.t1 | 2 | 2 | DUF2215 | 381 | 472 | 1.3e-10 | 41.1 | 9.7e-14 | 7.2e-10 | 38.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23461.t1 | gi|585702550|ref|XP_006897735.1| | PREDICTED: transmembrane protein 194A [Elephantulus edwardii] | 1.0e-14 |
| pfu_aug2.0_107.1_23461.t1 | gi|634873704|ref|XP_007948198.1| | PREDICTED: transmembrane protein 194A [Orycteropus afer afer] | 2.0e-14 |
| pfu_aug2.0_107.1_23461.t1 | gi|149571162|ref|XP_001515988.1| | PREDICTED: dnaJ homolog subfamily C member 10-like, partial [Ornithorhynchus anatinus] | 3.0e-14 |
| pfu_aug2.0_107.1_23461.t1 | gi|471390446|ref|XP_004379961.1| | PREDICTED: transmembrane protein 194A isoform X1 [Trichechus manatus latirostris] | 3.0e-13 |
| pfu_aug2.0_107.1_23461.t1 | gi|759165343|ref|XP_011373933.1| | PREDICTED: transmembrane protein 194A isoform X3 [Pteropus vampyrus] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23461.t1 atgaaaatgaaagaaattattttggttatcctgttcatattagatttatctatattgacatgttgtgttgaagaattgga ttacttcagggtattaggaataacaaaaaggtccagacaaaatgaaatcaagagggcgtttagaagtatatcgaaaagga tccatcctgacaaaaaccagtgtgatcccaaggctacagaaaagtttttgattttgaccaaggcgtttgaaaccttatac aatgaggacctgcggagcttatatcgggccaggaaccctatgtatgggtatatcaagcagtccgagtatgattgggactt acccgagtgttctaacacaacagattaccaagatggaccagccgggctgagaatatggttttttaagtgggccaggttat tctttaattttgtgacaaggccagctaccgtagccctaaattttgctgctcatctgtcttatttactagtgacaagtaag tttttatgtgtcctttccatagcgtaggccattctacatgttattctggctgccaagatatctatactgctgccctctct gttgacttcatggcaggtgacagctgtggccttactgttaatatgggcatgttacatatccgtccttatcaacattttgg aaagtattataaacggcatcagcatgtggaatttactctatctacaaaattacgttgtatatttcatcctttatacatgt ggagcacttgtacttacgatatactactttcgtaaatatccagtgtacagagatagacgctacattgagtggtgtggtta tgtacattgtgccgtcggtttgttacttgtttatgtatccatccctcacacggagagtgcggctgttgtgtgtgtctctg tcgtgtcatttacatggttcctgaaaacatcagcgccacttcttctgagatcattgaagtttatgatcaaaatgataaaa ttatctgtgatagctctgttgagatttttgttttatttgacgtgcctctttgccaacatttttacgaagtttttgtacat gataagcatccctttatatactgtaatagaactgccagtgactgtacccaagaaaacatggaaattatgttcttttgtta caaagtgtgcaatacatagcctcatcataggaatgagggagggctacctccttataaagaccaaaatgttctccaagtct ttcaatcataggtattcagtgagcactattcctaggaggttgttaagcagagtagagtacatcttagaaggcagagtaga aaccaggagacaactgaacgaactgagacggttctgtaagagtcccattcataattcatggaaaacagcattgtcactac aaaatttagaaaggtttattggctttgtgaatggacaggatcatttaacacaggaggaaaaagcggaacatgaacgtacc ggcaccatgtatcctcagagagaagactcggatgacagtgataatgaagagtga |
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Protein
| Protein ID | pfu_aug2.0_107.1_23461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23461.t1 MKMKEIILVILFILDLSILTCCVEELDYFRVLGITKRSRQNEIKRAFRSISKRIHPDKNQCDPKATEKFLILTKAFETLY NEDLRSLYRARNPMYGYIKQSEYDWDLPECSNTTDYQDGPAGLRIWFFKWARLFFNFVTRPATVALNFAAHLSYLLVTSK FLCVLSIAXAILHVILAAKISILLPSLLTSWQVTAVALLLIWACYISVLINILESIINGISMWNLLYLQNYVVYFILYTC GALVLTIYYFRKYPVYRDRRYIEWCGYVHCAVGLLLVYVSIPHTESAAVVCVSVVSFTWFLKTSAPLLLRSLKFMIKMIK LSVIALLRFLFYLTCLFANIFTKFLYMISIPLYTVIELPVTVPKKTWKLCSFVTKCAIHSLIIGMREGYLLIKTKMFSKS FNHRYSVSTIPRRLLSRVEYILEGRVETRRQLNELRRFCKSPIHNSWKTALSLQNLERFIGFVNGQDHLTQEEKAEHERT GTMYPQREDSDDSDNEE |
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