Gene
| Gene Model ID | pfu_aug2.0_107.1_23464 |
|---|---|
| Locus | scaffold107.1 : 169625 ... 175605 : - |
| To GenomeBrowser | scaffold107.1:169625..175605 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_99757.1_28089 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23464.t1 | 1 | 1 | Tctex-1 | 114 | 214 | 2.0e-22 | 78.9 | 2.1e-26 | 3.1e-22 | 78.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23464.t1 | gi|676436460|ref|XP_009047890.1| | hypothetical protein LOTGIDRAFT_111691 [Lottia gigantea] | 5.0e-34 |
| pfu_aug2.0_107.1_23464.t1 | gi|156393569|ref|XP_001636400.1| | predicted protein [Nematostella vectensis] | 8.0e-29 |
| pfu_aug2.0_107.1_23464.t1 | gi|672053221|ref|XP_008762112.1| | PREDICTED: tctex1 domain-containing protein 1 isoform X3 [Rattus norvegicus] | 1.0e-27 |
| pfu_aug2.0_107.1_23464.t1 | gi|205277340|ref|NP_001128502.1| | tctex1 domain-containing protein 1 [Rattus norvegicus] | 1.0e-27 |
| pfu_aug2.0_107.1_23464.t1 | gi|564351862|ref|XP_006238521.1| | PREDICTED: tctex1 domain-containing protein 1 isoform X2 [Rattus norvegicus] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23464.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23464.t1 atgagtacttcagtcgttaagaaggacaatcaaaaaaccgagaaagaacgacggcaatcgatgatgaatgacgccaccgc aaagacggacggcgctcccaatcggcgcaagtctatctacccagtaggagacaggaaacagtcactggaaccccctcacg gaggggcaagacgaccatccatggacgcccgcagaccctcacagtcggaccggaaacagtccatcgtggaatcgaacgcc ggaaggtcaaccctcatcatgacgtcagcaacgacgcaaagaccgaacgtcaagtacgaaaatacctacaaactagaacc tgacaaaaagtacaaaagtgacgaggtcaaaagaactataaaggaagtattagaaaaggaattagacggtgttaaatatg acaaagataagtgtaccggacttacaaagacgatagcagaaagcataaaacgtcaagttaaggttttaggctttgtccgt tacaagttggtcgtggtagtggccattggtcaacaggaagacgcccatccctcagtggcttttaccagtaggtgtatatg gaacgaacaaatggacaacttctccgagtatatttacaaaagtccttctctatttgccgtaggactagtctacgctatgt catttgattga |
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Protein
| Protein ID | pfu_aug2.0_107.1_23464.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23464.t1 MSTSVVKKDNQKTEKERRQSMMNDATAKTDGAPNRRKSIYPVGDRKQSLEPPHGGARRPSMDARRPSQSDRKQSIVESNA GRSTLIMTSATTQRPNVKYENTYKLEPDKKYKSDEVKRTIKEVLEKELDGVKYDKDKCTGLTKTIAESIKRQVKVLGFVR YKLVVVVAIGQQEDAHPSVAFTSRCIWNEQMDNFSEYIYKSPSLFAVGLVYAMSFD |
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