Gene
| Gene Model ID | pfu_aug2.0_107.1_23466 |
|---|---|
| Locus | scaffold107.1 : 187700 ... 197387 : + |
| To GenomeBrowser | scaffold107.1:187700..197387 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_53961.1_12814 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acyl-coenzyme a thioesterase 13 | GO:0005634 GO:0005856 GO:0008152 GO:0044444 GO:0047617 GO:0051289 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23466.t1 | 1 | 1 | 4HBT | 60 | 134 | 8.4e-14 | 51.4 | 3.0e-17 | 1.5e-13 | 50.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23466.t1 | gi|676438839|ref|XP_009048661.1| | hypothetical protein LOTGIDRAFT_157816 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_107.1_23466.t1 | gi|638253431|ref|NP_001279122.1| | acyl-CoA thioesterase 13 [Callorhinchus milii] | 1.99965e-42 |
| pfu_aug2.0_107.1_23466.t1 | gi|558205743|ref|XP_006106533.1| | PREDICTED: acyl-coenzyme A thioesterase 13 [Myotis lucifugus] | 1.99965e-42 |
| pfu_aug2.0_107.1_23466.t1 | gi|403270794|ref|XP_003927347.1| | PREDICTED: acyl-coenzyme A thioesterase 13 [Saimiri boliviensis boliviensis] | 4.00001e-41 |
| pfu_aug2.0_107.1_23466.t1 | gi|641712196|ref|XP_008145293.1| | PREDICTED: acyl-coenzyme A thioesterase 13 [Eptesicus fuscus] | 5.99994e-41 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23466.t1 atgacctctggattagttggaagcaaagcagtaaacttccttaaagaggtggtgaaacacaggaagtctgtgcggtcgtt cgagggtttattatttcagcagatagaggttgttgatggtggagagggtaggtgtgtatgtgagctgcccgtgacagagg accaccagaatcctttagggtcactacatggcggtatgacggcgactttggtggacgctgtgtctacgtgggcgttactg actacaccccaacaacagcctggagttagtgtggacttgagcgtttcgtatatgaaagcagtaaaggtgggagatattat tgtaatagatgcccaaactctcaaatgcggacggacattggccttcctcactgtggacatcaaatctaagacaaacggac agctagtagcacaaggaaaacataccaagtttataggaagctga |
|
Protein
| Protein ID | pfu_aug2.0_107.1_23466.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23466.t1 MTSGLVGSKAVNFLKEVVKHRKSVRSFEGLLFQQIEVVDGGEGRCVCELPVTEDHQNPLGSLHGGMTATLVDAVSTWALL TTPQQQPGVSVDLSVSYMKAVKVGDIIVIDAQTLKCGRTLAFLTVDIKSKTNGQLVAQGKHTKFIGS |
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