Gene
Gene Model ID | pfu_aug2.0_107.1_23475 |
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Locus | scaffold107.1 : 346750 ... 351916 : + |
To GenomeBrowser | scaffold107.1:346750..351916 |
Genes list of scaffold | scaffold107.1 |
Synonym | pfu_aug1.0_4475.1_59526 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_107.1_23475.t1 | 4 | 1 | Ig_2 | 33 | 65 | 2.2e-13 | 50.1 | 0.00074 | 1.6 | 8.9 |
pfu_aug2.0_107.1_23475.t1 | 4 | 1 | C1-set | 34 | 46 | 1.5e-06 | 28.0 | 1.2 | 2500.0 | -1.5 |
pfu_aug2.0_107.1_23475.t1 | 4 | 1 | I-set | 35 | 61 | 2.1e-13 | 49.8 | 0.037 | 79.0 | 3.2 |
pfu_aug2.0_107.1_23475.t1 | 4 | 1 | Ig_3 | 35 | 54 | 6.5e-08 | 32.9 | 0.042 | 88.0 | 3.7 |
pfu_aug2.0_107.1_23475.t1 | 4 | 1 | C2-set_2 | 38 | 47 | 5.9e-25 | 86.9 | 2.4 | 5000.0 | -2.6 |
pfu_aug2.0_107.1_23475.t1 | 4 | 2 | Ig_3 | 73 | 115 | 6.5e-08 | 32.9 | 2.8e-05 | 0.058 | 13.8 |
pfu_aug2.0_107.1_23475.t1 | 4 | 2 | Ig_2 | 78 | 115 | 2.2e-13 | 50.1 | 1.2e-06 | 0.0024 | 17.9 |
pfu_aug2.0_107.1_23475.t1 | 4 | 2 | C2-set_2 | 83 | 157 | 5.9e-25 | 86.9 | 1.4e-10 | 3.0e-07 | 30.2 |
pfu_aug2.0_107.1_23475.t1 | 4 | 2 | I-set | 83 | 171 | 2.1e-13 | 49.8 | 1.6e-05 | 0.033 | 14.0 |
pfu_aug2.0_107.1_23475.t1 | 4 | 2 | C1-set | 88 | 157 | 1.5e-06 | 28.0 | 0.02 | 42.0 | 4.2 |
pfu_aug2.0_107.1_23475.t1 | 4 | 3 | I-set | 191 | 269 | 2.1e-13 | 49.8 | 0.00014 | 0.3 | 10.9 |
pfu_aug2.0_107.1_23475.t1 | 4 | 3 | Ig_2 | 191 | 264 | 2.2e-13 | 50.1 | 0.0052 | 11.0 | 6.2 |
pfu_aug2.0_107.1_23475.t1 | 4 | 3 | C2-set_2 | 192 | 264 | 5.9e-25 | 86.9 | 2.2e-15 | 4.7e-12 | 45.6 |
pfu_aug2.0_107.1_23475.t1 | 4 | 3 | Ig_3 | 194 | 258 | 6.5e-08 | 32.9 | 0.0028 | 6.0 | 7.4 |
pfu_aug2.0_107.1_23475.t1 | 4 | 3 | C1-set | 206 | 264 | 1.5e-06 | 28.0 | 9.2e-07 | 0.002 | 18.1 |
pfu_aug2.0_107.1_23475.t1 | 4 | 4 | Ig_2 | 281 | 329 | 2.2e-13 | 50.1 | 2.9e-05 | 0.061 | 13.4 |
pfu_aug2.0_107.1_23475.t1 | 4 | 4 | Ig_3 | 281 | 334 | 6.5e-08 | 32.9 | 0.0014 | 3.0 | 8.4 |
pfu_aug2.0_107.1_23475.t1 | 4 | 4 | I-set | 288 | 354 | 2.1e-13 | 49.8 | 1.8e-06 | 0.0038 | 17.0 |
pfu_aug2.0_107.1_23475.t1 | 4 | 4 | C2-set_2 | 312 | 353 | 5.9e-25 | 86.9 | 0.003 | 6.3 | 6.7 |
pfu_aug2.0_107.1_23475.t1 | 4 | 4 | C1-set | 314 | 330 | 1.5e-06 | 28.0 | 0.2 | 420.0 | 1.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_107.1_23475.t1 | gi|759041824|ref|XP_011329745.1| | PREDICTED: hemicentin-2-like [Cerapachys biroi] | 4.0e-17 |
pfu_aug2.0_107.1_23475.t1 | gi|195399952|ref|XP_002058583.1| | GJ14505 [Drosophila virilis] | 3.0e-16 |
pfu_aug2.0_107.1_23475.t1 | gi|350411099|ref|XP_003489239.1| | 5.0e-16 | |
pfu_aug2.0_107.1_23475.t1 | gi|340714515|ref|XP_003395773.1| | 5.0e-16 | |
pfu_aug2.0_107.1_23475.t1 | gi|662197178|ref|XP_008471655.1| | PREDICTED: neural cell adhesion molecule 1-like [Diaphorina citri] | 1.0e-15 |
Transcript
Transcript ID | pfu_aug2.0_107.1_23475.t1 |
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Definition | - |
>pfu_aug2.0_107.1_23475.t1 atgtcactggtttatcataagtgttgtgtgtctgtatgccttttgatcttatttcttacatgggatacagcagcttccac tgctagggtatatccagcagttcttggcagctctgtgactttagagtgttcggttagacaagaagacaagctagtgtggg accgtggtgacggcagtantaacgataaaaaaaactgcatcgttttgttagagccaccgtatgtatggtctacgggtcca aatgggattatagaggagggtacaaaacaagttttcacatgtacggcagacggagggaaaccccctcccaatatggagtg gattctaatagatcgaaaagccaatcggaaatcgttcattgggttaaacacagaccatcgatacaccaatggaacataca gacgaacaaacagacttgaaattataacgtcacgtgacatgtacagagcctccatgatatgcaaggtgtcaatttcgtac ttttatcaagttcaacaaaccatagtgctggacgtaaacttgtacccattggcgccaaaattcacggatttcacaggatt atttgacgatggacgagtccacaatatcgaatgttacagtacaggaagtcgtccagctggctccatctactggcaaatcg acggtaaccctgtatcttctacagctgactctacgacaaagggcaccgatggactattttatcaaagttctaccttgtcg atgagactcacgaaaaatatccaaggtcaaatgctaaaatgtctggtaaccaatcaagtcctacaaaaccagcagaaacc tgatctgttcgtccaagtaatgcttttagcaaattttgcaccaagtattgttgctgacaatggttcgcgatcggtcattg aagacaatgacgtcatcatgacatgcgatgttgacgcaagaccattacctgtagcaggacaatttatttgggttcataac ggcaatccaatcacatctaacagtgtatacaatatcacaaatgatgtgttgtccgtatcaaaaatgacctccactctaca catttctccagtttctaaaaaaaatctagaggcccaaaagatgaatgactttaatgatgaagagcgactagccggagaga aagagaatgaatacagctatgatcatctagggtatttttaa |
Protein
Protein ID | pfu_aug2.0_107.1_23475.t1 |
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Definition | - |
>pfu_aug2.0_107.1_23475.t1 MSLVYHKCCVSVCLLILFLTWDTAASTARVYPAVLGSSVTLECSVRQEDKLVWDRGDGSXNDKKNCIVLLEPPYVWSTGP NGIIEEGTKQVFTCTADGGKPPPNMEWILIDRKANRKSFIGLNTDHRYTNGTYRRTNRLEIITSRDMYRASMICKVSISY FYQVQQTIVLDVNLYPLAPKFTDFTGLFDDGRVHNIECYSTGSRPAGSIYWQIDGNPVSSTADSTTKGTDGLFYQSSTLS MRLTKNIQGQMLKCLVTNQVLQNQQKPDLFVQVMLLANFAPSIVADNGSRSVIEDNDVIMTCDVDARPLPVAGQFIWVHN GNPITSNSVYNITNDVLSVSKMTSTLHISPVSKKNLEAQKMNDFNDEERLAGEKENEYSYDHLGYF |