Gene
| Gene Model ID | pfu_aug2.0_107.1_23481 |
|---|---|
| Locus | scaffold107.1 : 418306 ... 428185 : - |
| To GenomeBrowser | scaffold107.1:418306..428185 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_6470.1_52768 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ap-3 complex subunit delta-1 | GO:0015031 GO:0016020 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23481.t1 | 2 | 1 | BLVR | 133 | 273 | 1.5e-35 | 122.3 | 2.4e-37 | 1.7e-33 | 115.5 |
| pfu_aug2.0_107.1_23481.t1 | 2 | 2 | BLVR | 309 | 424 | 1.5e-35 | 122.3 | 1.7e-05 | 0.12 | 12.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23481.t1 | gi|524902971|ref|XP_005107705.1| | PREDICTED: AP-3 complex subunit delta-1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_107.1_23481.t1 | gi|524902969|ref|XP_005107704.1| | PREDICTED: AP-3 complex subunit delta-1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_107.1_23481.t1 | gi|524902967|ref|XP_005107703.1| | PREDICTED: AP-3 complex subunit delta-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_107.1_23481.t1 | gi|676422852|ref|XP_009044017.1| | hypothetical protein LOTGIDRAFT_177167 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_107.1_23481.t1 | gi|512863321|ref|XP_004890376.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23481.t1 atgatagacaaactacccatgtttgtacagagtgctgatctggaggtcaaagataggagtgctgatctagaggctcaagt taggagttctgatcaagaggcccaagatagggcgtgttgtatgttacaacttgtgaagtatgtgatgaagttaatggaca agggtgcaccagtagcagatgaggtgtgctcactgtttgccggggatttgaatcctgtagcacctaaagcccagagaaaa gtccctgtaccagagggacttgacctggacaagtggatcaatgagccaccatcagagagctcgtcagaagaagatgtggg tgtgtccatattctctttaaagaacgaggacagcaaatcctttggataccaaaatgataagaaactgccagaaccaacag aagaagaactggaagagaggagaaagcagaggaagatagaacagatgcacaacccccattacctcaggatggacaataaa aagaagaagaagaaagaaaatgcagacgatgtaatggatgaggagagtcctgttgtaaagattgacctgtctgttccact ccatgtacctggtcttacatcttcagataagtatatgaaaatgtcgttacaagatggtgagaggcctgggaagaagggaa agagaggaaagcacaagaaaaggaggaaaggtcaggtgactgaggattccgaggaggaggtgctagcacaacatcaagtc agcactgccctggacatgccagagggcgccgacacctcagacaaggaagatgaaagaaaatcctcagatccatttagaag attggacatgaacctagacgaaagagatgagagcgctgggtctgcatcaaatctccttatggaaacagacacagttactt cccctgaagccgaaaaagagtttgtcaaagatgatacccccacccctaatcacatacaggaggactctaaacaaaaggat gatgatatggaattttggttatccaataacggtacacctacagaggaaaaagtggcagcaggaaatactgaagtgaaagt gaaagtaaacgataaggatgtatctagtgcggaagaagacactatcaaagagaagctgaagaagaagaagaaggagaaga aaaagaaagagaagaaaacaaagaaggataagaagttacgggcggagtatgaggaagctgaggggatagccacaccttca aaagaagaaatcccaccctcccaacaagatacccctatgacagtgcaactccctatgggtagtacacaccatgatgctat aagggttccgttcttgttactgccgggaggtcagaatgaaggacagtttgcattctctgtacaggacattaataccgctc agaaacttaaagggactcttacttacatattgaagtctgatgatggttctacccatgagaaaatagacttcaagttgaat tttccatgcagttcttttctagtctccactccttgtaaaggatcgtcgtttacctctttgcttgaacaaggagaattaac agagaaaagttcttcacagttcacaccgtctgatgaggaatttcagcatattttagccaaattgtgtttctttcatcatt ttatagttgtagagcacgtaggtgatagtgcatcattatacagcaacaagtccatgcaaggttatcatgtatgtttactt gtcaaaacggttaaaaaagaattgaaaatagatgggaaaagtacagacaataatttattatctaacgttttacaagaaat caaggatacattagtttag |
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Protein
| Protein ID | pfu_aug2.0_107.1_23481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23481.t1 MIDKLPMFVQSADLEVKDRSADLEAQVRSSDQEAQDRACCMLQLVKYVMKLMDKGAPVADEVCSLFAGDLNPVAPKAQRK VPVPEGLDLDKWINEPPSESSSEEDVGVSIFSLKNEDSKSFGYQNDKKLPEPTEEELEERRKQRKIEQMHNPHYLRMDNK KKKKKENADDVMDEESPVVKIDLSVPLHVPGLTSSDKYMKMSLQDGERPGKKGKRGKHKKRRKGQVTEDSEEEVLAQHQV STALDMPEGADTSDKEDERKSSDPFRRLDMNLDERDESAGSASNLLMETDTVTSPEAEKEFVKDDTPTPNHIQEDSKQKD DDMEFWLSNNGTPTEEKVAAGNTEVKVKVNDKDVSSAEEDTIKEKLKKKKKEKKKKEKKTKKDKKLRAEYEEAEGIATPS KEEIPPSQQDTPMTVQLPMGSTHHDAIRVPFLLLPGGQNEGQFAFSVQDINTAQKLKGTLTYILKSDDGSTHEKIDFKLN FPCSSFLVSTPCKGSSFTSLLEQGELTEKSSSQFTPSDEEFQHILAKLCFFHHFIVVEHVGDSASLYSNKSMQGYHVCLL VKTVKKELKIDGKSTDNNLLSNVLQEIKDTLV |
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