Gene
| Gene Model ID | pfu_aug2.0_107.1_23483 |
|---|---|
| Locus | scaffold107.1 : 441056 ... 446918 : + |
| To GenomeBrowser | scaffold107.1:441056..446918 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_1827.1_00864 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium-dependent protein kinase 29-like | GO:0005488 GO:0005737 GO:0016772 GO:0043231 GO:0044237 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23483.t1 | 3 | 1 | EF-hand_7 | 11 | 67 | 1.6e-27 | 95.4 | 3.3e-10 | 4.9e-07 | 29.7 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 1 | EF-hand_1 | 11 | 31 | 1.1e-22 | 77.5 | 1.0e-07 | 0.00015 | 20.7 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 1 | EF-hand_6 | 11 | 31 | 6.8e-18 | 62.8 | 3.0e-07 | 0.00045 | 19.8 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 1 | EF-hand_5 | 11 | 31 | 2.0e-15 | 55.3 | 1.5e-05 | 0.022 | 14.1 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 1 | EF-hand_10 | 12 | 24 | 7.9e-06 | 25.4 | 0.013 | 20.0 | 4.9 |
| pfu_aug2.0_107.1_23483.t1 | 3 | 1 | EF-hand_8 | 21 | 67 | 8.6e-18 | 63.6 | 2.7e-08 | 3.9e-05 | 23.1 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 2 | EF-hand_10 | 24 | 65 | 7.9e-06 | 25.4 | 2.7e-05 | 0.039 | 13.6 |
| pfu_aug2.0_107.1_23483.t1 | 3 | 2 | EF-hand_7 | 44 | 104 | 1.6e-27 | 95.4 | 1.6e-12 | 2.3e-09 | 37.2 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 2 | EF-hand_1 | 47 | 69 | 1.1e-22 | 77.5 | 0.00011 | 0.17 | 11.2 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 2 | EF-hand_6 | 49 | 71 | 6.8e-18 | 62.8 | 0.0055 | 8.1 | 6.6 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 2 | EF-hand_5 | 53 | 57 | 2.0e-15 | 55.3 | 0.83 | 1200.0 | -1.0 |
| pfu_aug2.0_107.1_23483.t1 | 3 | 2 | EF-hand_8 | 61 | 101 | 8.6e-18 | 63.6 | 0.00036 | 0.53 | 9.9 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 3 | EF-hand_1 | 80 | 105 | 1.1e-22 | 77.5 | 1.6e-09 | 2.4e-06 | 26.4 |
| pfu_aug2.0_107.1_23483.t1 | 3 | 3 | EF-hand_7 | 81 | 140 | 1.6e-27 | 95.4 | 8.7e-16 | 1.3e-12 | 47.6 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 3 | EF-hand_6 | 81 | 105 | 6.8e-18 | 62.8 | 3.3e-09 | 4.9e-06 | 25.9 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 3 | EF-hand_5 | 82 | 104 | 2.0e-15 | 55.3 | 1.6e-08 | 2.4e-05 | 23.4 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 3 | EF-hand_10 | 82 | 102 | 7.9e-06 | 25.4 | 0.00049 | 0.73 | 9.5 |
| pfu_aug2.0_107.1_23483.t1 | 3 | 3 | EF-hand_8 | 93 | 140 | 8.6e-18 | 63.6 | 1.5e-14 | 2.2e-11 | 43.2 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 4 | EF-hand_1 | 115 | 140 | 1.1e-22 | 77.5 | 1.7e-09 | 2.5e-06 | 26.3 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 4 | EF-hand_5 | 116 | 138 | 2.0e-15 | 55.3 | 1.4e-07 | 0.00021 | 20.4 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 4 | EF-hand_6 | 121 | 140 | 6.8e-18 | 62.8 | 0.00014 | 0.21 | 11.5 |
| pfu_aug2.0_107.1_23483.t1 | 4 | 4 | EF-hand_10 | 121 | 137 | 7.9e-06 | 25.4 | 1.1 | 1600.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23483.t1 | gi|721693555|ref|XP_010240253.1| | PREDICTED: calcium-dependent protein kinase 29-like [Brachypodium distachyon] | 1.0e-20 |
| pfu_aug2.0_107.1_23483.t1 | gi|356501529|ref|XP_003519577.1| | PREDICTED: calcium-dependent protein kinase 9-like isoform 1 [Glycine max] | 2.0e-20 |
| pfu_aug2.0_107.1_23483.t1 | gi|115459896|ref|NP_001053548.1| | Os04g0560600 [Oryza sativa Japonica Group] | 2.0e-20 |
| pfu_aug2.0_107.1_23483.t1 | gi|115464625|ref|NP_001055912.1| | Os05g0491900 [Oryza sativa Japonica Group] | 3.0e-20 |
| pfu_aug2.0_107.1_23483.t1 | gi|242076774|ref|XP_002448323.1| | hypothetical protein SORBIDRAFT_06g025220 [Sorghum bicolor] | 3.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23483.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23483.t1 atggcggacgagcaaagaaagttttggggagacttttttgacaagtgtgataaggacaagagtggaacaatgaccgtaga tgaattaaaggcaaaactacaacagattaacccggacatcaccgatgctcaagtctgcgacatgtttgtgggtgttgata cggatggaagcaaagatgtaacgaagaaagagtttttgacagaaatgatgaaaaagaacgcaaaagaatcaaaggcagaa tatgaaaaaatctttcaaaaatgggacaaggatggcagtggtacattaacaagagatgaactgaagaaggcagttctaga gaaaagacacttcaatgaagatgaaatcgatgacatgcttgctcaggcagacaaaaatggcgacggtgtaatcaattatt gcgaatttatgaaatatatgtgcggtgaacagagttcacagaaagcttcataa |
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Protein
| Protein ID | pfu_aug2.0_107.1_23483.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23483.t1 MADEQRKFWGDFFDKCDKDKSGTMTVDELKAKLQQINPDITDAQVCDMFVGVDTDGSKDVTKKEFLTEMMKKNAKESKAE YEKIFQKWDKDGSGTLTRDELKKAVLEKRHFNEDEIDDMLAQADKNGDGVINYCEFMKYMCGEQSSQKAS |
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