Gene
| Gene Model ID | pfu_aug2.0_107.1_23484 |
|---|---|
| Locus | scaffold107.1 : 448166 ... 457571 : + |
| To GenomeBrowser | scaffold107.1:448166..457571 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin-like protein 5 | GO:0000003 GO:0000226 GO:0005488 GO:0022402 GO:0030427 GO:0043227 GO:0044424 GO:0051179 GO:0071822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23484.t1 | 4 | 1 | EF-hand_6 | 11 | 36 | 1.4e-23 | 80.6 | 7.5e-09 | 8.5e-06 | 25.2 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 1 | EF-hand_1 | 12 | 37 | 1.0e-25 | 87.0 | 6.4e-09 | 7.3e-06 | 24.9 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 1 | EF-hand_5 | 12 | 35 | 4.0e-23 | 79.6 | 1.2e-09 | 1.4e-06 | 27.3 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 1 | SPARC_Ca_bdg | 12 | 31 | 1.9e-08 | 34.3 | 0.0041 | 4.6 | 7.2 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 1 | EF-hand_7 | 13 | 70 | 1.9e-29 | 101.5 | 1.7e-12 | 2.0e-09 | 37.4 |
| pfu_aug2.0_107.1_23484.t1 | 1 | 1 | EF-hand_9 | 13 | 74 | 4.1e-06 | 26.5 | 8.6e-09 | 9.8e-06 | 25.4 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 1 | EF-hand_8 | 15 | 36 | 2.2e-13 | 49.6 | 0.0012 | 1.4 | 8.5 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 2 | EF-hand_8 | 22 | 69 | 2.2e-13 | 49.6 | 5.0e-06 | 0.0057 | 16.2 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 2 | EF-hand_1 | 48 | 74 | 1.0e-25 | 87.0 | 2.6e-07 | 0.00029 | 19.9 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 2 | SPARC_Ca_bdg | 48 | 68 | 1.9e-08 | 34.3 | 0.073 | 83.0 | 3.2 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 2 | EF-hand_7 | 49 | 106 | 1.9e-29 | 101.5 | 5.4e-14 | 6.1e-11 | 42.2 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 2 | EF-hand_6 | 50 | 70 | 1.4e-23 | 80.6 | 1.6e-05 | 0.019 | 14.8 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 2 | EF-hand_5 | 54 | 70 | 4.0e-23 | 79.6 | 6.9e-06 | 0.0079 | 15.5 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 3 | EF-hand_7 | 84 | 142 | 1.9e-29 | 101.5 | 1.5e-14 | 1.7e-11 | 44.0 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 3 | EF-hand_6 | 84 | 107 | 1.4e-23 | 80.6 | 1.1e-07 | 0.00013 | 21.5 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 3 | EF-hand_1 | 85 | 107 | 1.0e-25 | 87.0 | 2.6e-07 | 0.0003 | 19.8 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 3 | EF-hand_5 | 86 | 106 | 4.0e-23 | 79.6 | 1.4e-07 | 0.00016 | 20.8 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 3 | SPARC_Ca_bdg | 88 | 140 | 1.9e-08 | 34.3 | 5.3e-08 | 6.0e-05 | 23.0 |
| pfu_aug2.0_107.1_23484.t1 | 3 | 3 | EF-hand_8 | 96 | 140 | 2.2e-13 | 49.6 | 1.3e-12 | 1.5e-09 | 37.3 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 4 | EF-hand_1 | 118 | 143 | 1.0e-25 | 87.0 | 5.6e-10 | 6.4e-07 | 28.2 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 4 | EF-hand_5 | 124 | 139 | 4.0e-23 | 79.6 | 3.1e-07 | 0.00035 | 19.7 |
| pfu_aug2.0_107.1_23484.t1 | 4 | 4 | EF-hand_6 | 125 | 143 | 1.4e-23 | 80.6 | 6.6e-07 | 0.00075 | 19.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23484.t1 | gi|562860286|ref|XP_006158531.1| | PREDICTED: calmodulin-like protein 5 [Tupaia chinensis] | 3.0e-23 |
| pfu_aug2.0_107.1_23484.t1 | gi|731210125|ref|XP_010619744.1| | PREDICTED: calmodulin-like protein 5 [Fukomys damarensis] | 1.0e-22 |
| pfu_aug2.0_107.1_23484.t1 | gi|512894218|ref|XP_004897707.1| | 3.0e-22 | |
| pfu_aug2.0_107.1_23484.t1 | gi|109506062|ref|XP_001062982.1| | PREDICTED: calmodulin-like protein 5 [Rattus norvegicus] | 2.0e-21 |
| pfu_aug2.0_107.1_23484.t1 | gi|743698867|ref|XP_010960641.1| | PREDICTED: calmodulin-like [Camelus bactrianus] | 4.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23484.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23484.t1 atggaaagcgaagaagataaaagaaagtactacaacaaagtgtttgactcggctgacttaaacaaagatggacgtataac aatcaaagaactgaagaaattcctgagagaaaaatgcaaagaaaatatttcggaaagggatgtagcgaagatcttttgtg accttgacattgacggagatggagaaataacaagattagaattcctgacagaaatgatgaaactagatccaaaggactct cgacaaagatatgaagaatgtttcagaagatgggataagaatgctgatggtaaactgagcagggaagaaattaaagctgc atcttcagagatcggaatcttctcagatcaagaaattgacctcatgatagagaaagtagataggaacaaggatgggttta tagactgggaagaatttctttgtgctctgtgcctggacgaataa |
|
Protein
| Protein ID | pfu_aug2.0_107.1_23484.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23484.t1 MESEEDKRKYYNKVFDSADLNKDGRITIKELKKFLREKCKENISERDVAKIFCDLDIDGDGEITRLEFLTEMMKLDPKDS RQRYEECFRRWDKNADGKLSREEIKAASSEIGIFSDQEIDLMIEKVDRNKDGFIDWEEFLCALCLDE |
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