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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_107.1_23485
Locus scaffold107.1 : 459853 ... 464665 : -
To GenomeBrowser scaffold107.1:459853..464665
Genes list of scaffold scaffold107.1
Synonym pfu_aug1.0_16689.1_61642

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_107.1_23485.t1 1 1 7tm_1 49 300 7.6e-38 130.1 6.19934e-42 9.2e-38 129.8

Transcript
Transcript IDpfu_aug2.0_107.1_23485.t1
Definition-
>pfu_aug2.0_107.1_23485.t1
atggacacctcaactgagtatttcgtgaatggctctctcgataacactaccctgagtcctgtccccagtagcagagcagg
gttccctcccttactggtagccttcatatccttacagcagacggtatttgtgatctccttcatcggtaatacctttgtcg
tggtcatcttctccatgtacatcaagggcagcatcacgaacaagtttatcatcaacttggccatcaacgacctgttcacg
ggactgtcgtctggttcgcagatcttctactttctgtatagagatctaactaagaacatgtactcctgctttttgcgcta
tcaggttgtctccgtcatgacctttgcctctcagttcaacatgaccttcatcaccgccgatcgctttatcgccatttgcg
gtggcccgactttgtaccagaagctaatgaccaaaaggacgtccaacatcatgatagcactggcctgggtgatccccctc
ctggtctgcagccttcctttcatggggttcaacaagtgggatttgaagccgcggtgttcgttcgcctacatctttgagga
gtggtactacctagtaccttccaccactatctacaccctgatgttggccaccctactcatgtacgccctgatcctcagga
aggctttcaccctactccggagatccctggacaacaccaaggagacgaatgtagaaaggagggaagctctccaacaatcc
atcaggagtgctaaggtcaccgccaccatcaccatcgtctttattctttgctgggctccttacgaactttaccaattcaa
gtacggtcttggcgatccacgtgatctggcgaactttgacctttccagttggcttgttttcctgggaatcgctaacagca
tgatgaacccctttatttatgcttggcagaaatcagacttccggaagaacttggcatctatcctctgccctacaggatgg
aacaaatcatcagaggaagtgacgtcaaaaggcacgtcaatgacgaaagctgtcgaagaatcaagaccaccaattgaaga
ctga

Protein
Protein IDpfu_aug2.0_107.1_23485.t1
Definition-
>pfu_aug2.0_107.1_23485.t1
MDTSTEYFVNGSLDNTTLSPVPSSRAGFPPLLVAFISLQQTVFVISFIGNTFVVVIFSMYIKGSITNKFIINLAINDLFT
GLSSGSQIFYFLYRDLTKNMYSCFLRYQVVSVMTFASQFNMTFITADRFIAICGGPTLYQKLMTKRTSNIMIALAWVIPL
LVCSLPFMGFNKWDLKPRCSFAYIFEEWYYLVPSTTIYTLMLATLLMYALILRKAFTLLRRSLDNTKETNVERREALQQS
IRSAKVTATITIVFILCWAPYELYQFKYGLGDPRDLANFDLSSWLVFLGIANSMMNPFIYAWQKSDFRKNLASILCPTGW
NKSSEEVTSKGTSMTKAVEESRPPIED

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