Gene
| Gene Model ID | pfu_aug2.0_107.1_23486 |
|---|---|
| Locus | scaffold107.1 : 496716 ... 504725 : + |
| To GenomeBrowser | scaffold107.1:496716..504725 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_6956.1_02355 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23486.t1 | 3 | 1 | F5_F8_type_C | 14 | 118 | 7.5e-15 | 54.9 | 3.4e-18 | 2.6e-14 | 53.1 |
| pfu_aug2.0_107.1_23486.t1 | 3 | 2 | F5_F8_type_C | 163 | 183 | 7.5e-15 | 54.9 | 0.55 | 4000.0 | -2.5 |
| pfu_aug2.0_107.1_23486.t1 | 3 | 3 | F5_F8_type_C | 250 | 270 | 7.5e-15 | 54.9 | 0.55 | 4000.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23486.t1 | gi|742238823|ref|XP_010903285.1| | PREDICTED: fucolectin-like [Esox lucius] | 2.0e-15 |
| pfu_aug2.0_107.1_23486.t1 | gi|260837246|ref|XP_002613616.1| | hypothetical protein BRAFLDRAFT_226961 [Branchiostoma floridae] | 4.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23486.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23486.t1 atggatggagacagtagctcagacttctatcatttttcatgtacgcataccgctgagtcgaacactccctattggtacgt ggaccttggtaatgaacgcaatatacaacacgtggatataacaaacagaggagattgttgtggtgagtactatgaatcac ctgagcgactacatgatgttgaggttactgtagctggacctaacaaggagtttaacatgatatgtggtaccttcaaagga cccggtaccgcatcccagatagtcgtcattgagtgtccacacggaatgaaggggagatatgtaaaacttcagattgtgga aggaacaggaaacatccttacactatgcgaggttaaaagataccaagacgatgtgctgttcatcaataatccaaaattcg cggattacctcatcagtatctatcgttcgaagattgaagtaaaagaaactacagagacaattaattcagaatcctttttg gacataatgttgtcctacgacactgatggcaacgtgagcacctcactctatgacaaagaagatcctgacgataaccccat catcacccacaacagacaccaccatattgagcatcgacagacccctagcaagctagagagataccaagacgatgtgctgt tcatcaataatccaaaattcgcggattacctcatcagtatctatcgttcgaagattgaagtaaaagaaactacagagaca attaattcagaatcctttttggacataatgttgtcctacgacactgatggcaacgtgagcacctcactctatgacaaaga agatcctgacgataaccccatcatcacccacaacagacaccaccatattgagcatcgacagacccctagcaagctagagg tgggaccaggtgcccgggaggagctataa |
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Protein
| Protein ID | pfu_aug2.0_107.1_23486.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23486.t1 MDGDSSSDFYHFSCTHTAESNTPYWYVDLGNERNIQHVDITNRGDCCGEYYESPERLHDVEVTVAGPNKEFNMICGTFKG PGTASQIVVIECPHGMKGRYVKLQIVEGTGNILTLCEVKRYQDDVLFINNPKFADYLISIYRSKIEVKETTETINSESFL DIMLSYDTDGNVSTSLYDKEDPDDNPIITHNRHHHIEHRQTPSKLERYQDDVLFINNPKFADYLISIYRSKIEVKETTET INSESFLDIMLSYDTDGNVSTSLYDKEDPDDNPIITHNRHHHIEHRQTPSKLEVGPGAREEL |
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