Gene
| Gene Model ID | pfu_aug2.0_107.1_23487 |
|---|---|
| Locus | scaffold107.1 : 519106 ... 521620 : + |
| To GenomeBrowser | scaffold107.1:519106..521620 |
| Genes list of scaffold | scaffold107.1 |
| Synonym | pfu_aug1.0_6956.1_02354 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_107.1_23487.t1 | 1 | 1 | F5_F8_type_C | 44 | 164 | 3.0e-16 | 59.4 | 2.6e-20 | 3.9e-16 | 59.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_107.1_23487.t1 | gi|556994244|ref|XP_006001151.1| | PREDICTED: uncharacterized protein LOC102349841 [Latimeria chalumnae] | 4.0e-23 |
| pfu_aug2.0_107.1_23487.t1 | gi|617454944|ref|XP_007569936.1| | PREDICTED: uncharacterized protein LOC103150310 [Poecilia formosa] | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_107.1_23487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23487.t1 atggtccttaaatttcggattattgatgtacagcacgtcatctatctttctgaaggttctataagaaacttggctcttag aaaggaaacatttcaaagtgggacgtaccgctacaatgaatatcactatgacatcaatggtacatcagacaaggcggtgg atggagacagtagtgccgacttctatttactttcatgcgcccatactgttgagtcgaacactccctattggtacgtggac cttggtaatgagcaccgcattcaacatgtagaaattacaaatagaggagactgctgtgctgagcgactacatgatgttga ggtttcagtagcaggacctaacaaggagtttaacatgatatgtggttccttcaaaggacccggtacggcgtcccagatag ttgtcattgactgtccatacggaatgaaggggagatatgtaaaacttcagattgtggaaggaacagaaaactcactgaca ctatgtgaggttaaagttatgggactgtag |
|
Protein
| Protein ID | pfu_aug2.0_107.1_23487.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_107.1_23487.t1 MVLKFRIIDVQHVIYLSEGSIRNLALRKETFQSGTYRYNEYHYDINGTSDKAVDGDSSADFYLLSCAHTVESNTPYWYVD LGNEHRIQHVEITNRGDCCAERLHDVEVSVAGPNKEFNMICGSFKGPGTASQIVVIDCPYGMKGRYVKLQIVEGTENSLT LCEVKVMGL |
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