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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1075.1_18068
Locus scaffold1075.1 : 56526 ... 70755 : +
To GenomeBrowser scaffold1075.1:56526..70755
Genes list of scaffold scaffold1075.1
Synonym pfu_aug1.0_82.1_21954

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1075.1_18068.t1 1 1 FKBP_C 41 129 6.8e-26 90.1 6.0e-30 8.9e-26 89.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1075.1_18068.t1 gi|195384022|ref|XP_002050723.1| GJ22316 [Drosophila virilis] 1.0e-27
pfu_aug2.0_1075.1_18068.t1 gi|195426608|ref|XP_002061406.1| GK20742 [Drosophila willistoni] 5.0e-27
pfu_aug2.0_1075.1_18068.t1 gi|557750019|ref|XP_005174774.1| PREDICTED: FK506-binding protein 2 [Musca domestica] 7.0e-27
pfu_aug2.0_1075.1_18068.t1 gi|295656744|ref|XP_002788965.1| FK506-binding protein [Paracoccidioides sp. 'lutzii' Pb01] 9.0e-27
pfu_aug2.0_1075.1_18068.t1 gi|194754104|ref|XP_001959337.1| GF12094 [Drosophila ananassae] 2.0e-26

Transcript
Transcript IDpfu_aug2.0_1075.1_18068.t1
Definition-
>pfu_aug2.0_1075.1_18068.t1
atgaagcggtttgaagcaatttgtttgtttatagtcttcagctgtgtttgttggaccgagggggaagatgtaactgaact
aaaagtagaagttttaaaagaaggagattgtctccgaagagtcgaacctttcgacacgctgaggattcacttcgtaggct
acttaacgaatggaacgaaatttacgacgagctatgatcatatgaagcctcacttggtcactcttggagaatcaaatatt
attaagggattacacgaaggacttcttaatatgtgtgaaggagaaacgcgcaaactgaccataccttaccaactagctta
tggtgaaagaggagtagaaggacaagtaccaagaaaagccacggtaatatttaaggtgcagctgataaacatacaaaacc
gaaacccacattacacctcctaa

Protein
Protein IDpfu_aug2.0_1075.1_18068.t1
Definition-
>pfu_aug2.0_1075.1_18068.t1
MKRFEAICLFIVFSCVCWTEGEDVTELKVEVLKEGDCLRRVEPFDTLRIHFVGYLTNGTKFTTSYDHMKPHLVTLGESNI
IKGLHEGLLNMCEGETRKLTIPYQLAYGERGVEGQVPRKATVIFKVQLINIQNRNPHYTS

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