Gene
| Gene Model ID | pfu_aug2.0_1075.1_18069 |
|---|---|
| Locus | scaffold1075.1 : 77836 ... 87289 : + |
| To GenomeBrowser | scaffold1075.1:77836..87289 |
| Genes list of scaffold | scaffold1075.1 |
| Synonym | pfu_aug1.0_82.1_21956 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1075.1_18069.t2 | 1 | 1 | FKBP_C | 37 | 128 | 4.1e-33 | 113.2 | 5.5e-36 | 6.8e-33 | 112.5 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 1 | EF-hand_1 | 138 | 160 | 1.1e-09 | 36.8 | 3.3e-06 | 0.0041 | 16.3 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 1 | EF-hand_8 | 138 | 156 | 7.3e-06 | 25.5 | 0.003 | 3.7 | 7.2 |
| pfu_aug2.0_1075.1_18069.t2 | 1 | 1 | EF-hand_7 | 139 | 201 | 1.8e-11 | 43.9 | 2.4e-14 | 3.0e-11 | 43.2 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 1 | EF-hand_5 | 139 | 159 | 6.5e-09 | 34.7 | 1.8e-06 | 0.0022 | 17.2 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 1 | EF-hand_6 | 139 | 161 | 6.6e-08 | 31.8 | 9.2e-06 | 0.011 | 15.4 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 2 | EF-hand_8 | 178 | 202 | 7.3e-06 | 25.5 | 1.5e-06 | 0.0019 | 17.7 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 2 | EF-hand_1 | 181 | 201 | 1.1e-09 | 36.8 | 2.0e-08 | 2.4e-05 | 23.2 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 2 | EF-hand_5 | 181 | 202 | 6.5e-09 | 34.7 | 1.7e-07 | 0.00021 | 20.4 |
| pfu_aug2.0_1075.1_18069.t2 | 2 | 2 | EF-hand_6 | 181 | 201 | 6.6e-08 | 31.8 | 9.8e-06 | 0.012 | 15.4 |
Transcript
| Transcript ID | pfu_aug2.0_1075.1_18069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18069.t1 atgttgcgattcgtagcaatttgcttgtttgcagttttatgcagcttttgttgggccgaagatgaagtgactgaactgaa aatagacgttgtagaaaaaaaagaatgcgaaaggaaaacgaagcgtttggatatgttaagcatgcattacacaggcacct tgacagatggaacgaaatttgacaccagctatgatcatggtcagccattccagttccaacttggtatcggtcaggttatt aagggatgggaccagggtctaacagatatgtgtgtcggagagaaacgtaaacttactattccacatcacctgggttatgg agaacaaggggcaggtgacaaaattcctggtaaagccacattgttatttgaggtagagcttcttgatatacaagatggac ctaaaccagagaacatctttaaaaagatagataaagattccgataatcagctatctagagatgagatttccgaacattta gtcgaactctcacgtcaacagtatggatttcccatcgacaacaaaagtcaggagcacataagcgtcgtggacggaatatt tcgttgggaagatggtaataaagatggatttattacgcacgaggaattttcgggaccaaagcacgatgaactttga |
|
| Transcript ID | pfu_aug2.0_1075.1_18069.t2 |
| Definition | - |
>pfu_aug2.0_1075.1_18069.t2 atgttgcgattcgtagcaatttgcttgtttgcagttttatgcagcttttgttgggccgaagatgaagtgactgaactgaa aatagacgttgtagaaaaaaaagaatgcgaaaggaaaacgaagcgtttggatatgttaagcatgcattacacaggcacct tgacagatggaacgaaatttgacaccagctatgatcatggtcagccattccagttccaacttggtatcggtcaggttatt aagggatgggaccagggtctaacagatatgtgtgtcggagagaaacgtaaacttactattccacatcacctgggttatgg agaacaaggggcaggtgacaaaattcctggtaaagccacattgttatttgaggtagagcttcttgatatacaagatggac ctaaaccagagaacatctttaaaaagatagataaagattccgataatcagctatctagagatgagatttcgaactttatt aacgaacaaaatgaacaatcgggacaaaaaacggaagaaaaagacgaacataaccaagttatagagtcgatattccaaca tgaagataaagataaagatggcgttatatcgtttgaagaattcagtggtccaaaacacgatgagctataattcaaaattt catggaggccgagtacaaacagatga |
|
Protein
| Protein ID | pfu_aug2.0_1075.1_18069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18069.t1 MLRFVAICLFAVLCSFCWAEDEVTELKIDVVEKKECERKTKRLDMLSMHYTGTLTDGTKFDTSYDHGQPFQFQLGIGQVI KGWDQGLTDMCVGEKRKLTIPHHLGYGEQGAGDKIPGKATLLFEVELLDIQDGPKPENIFKKIDKDSDNQLSRDEISEHL VELSRQQYGFPIDNKSQEHISVVDGIFRWEDGNKDGFITHEEFSGPKHDEL |
|
| Protein ID | pfu_aug2.0_1075.1_18069.t2 |
| Definition | - |
>pfu_aug2.0_1075.1_18069.t2 MLRFVAICLFAVLCSFCWAEDEVTELKIDVVEKKECERKTKRLDMLSMHYTGTLTDGTKFDTSYDHGQPFQFQLGIGQVI KGWDQGLTDMCVGEKRKLTIPHHLGYGEQGAGDKIPGKATLLFEVELLDIQDGPKPENIFKKIDKDSDNQLSRDEISNFI NEQNEQSGQKTEEKDEHNQVIESIFQHEDKDKDGVISFEEFSGPKHDELXFKISWRPSTNR |
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