Gene
| Gene Model ID | pfu_aug2.0_1075.1_18072 |
|---|---|
| Locus | scaffold1075.1 : 104326 ... 109265 : + |
| To GenomeBrowser | scaffold1075.1:104326..109265 |
| Genes list of scaffold | scaffold1075.1 |
| Synonym | pfu_aug1.0_82.1_21959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1075.1_18072.t1 | 1 | 1 | FKBP_C | 75 | 142 | 8.6e-16 | 57.7 | 6.7e-19 | 1.7e-15 | 56.8 |
| pfu_aug2.0_1075.1_18072.t1 | 1 | 1 | EF-hand_7 | 150 | 213 | 4.5e-07 | 29.9 | 4.1e-10 | 1.0e-06 | 28.7 |
| pfu_aug2.0_1075.1_18072.t1 | 2 | 1 | EF-hand_6 | 150 | 171 | 7.6e-06 | 25.3 | 4.8e-05 | 0.12 | 12.3 |
| pfu_aug2.0_1075.1_18072.t1 | 2 | 2 | EF-hand_6 | 191 | 213 | 7.6e-06 | 25.3 | 0.00015 | 0.38 | 10.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1075.1_18072.t1 | gi|736201482|ref|XP_010774615.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP14 [Notothenia coriiceps] | 1.0e-23 |
| pfu_aug2.0_1075.1_18072.t1 | gi|674090983|ref|XP_008853562.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP7 isoform X1 [Nannospalax galili] | 5.0e-23 |
| pfu_aug2.0_1075.1_18072.t1 | gi|23956366|ref|NP_705801.1| | peptidyl-prolyl cis-trans isomerase FKBP14 precursor [Mus musculus] | 8.0e-23 |
| pfu_aug2.0_1075.1_18072.t1 | gi|532005671|ref|XP_005346677.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP7 isoform X1 [Microtus ochrogaster] | 9.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1075.1_18072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18072.t1 atgatttggacaaacgtctgcatcgttcttttgtcgtctgctctgtttgcacaaggcttcgcgaatccggatctggatcc gaatttgaaaatagaggtaacacggaaagcacacgattgtaagaaagttacaagagaaagcgttatactagcttcttcga gaatggaacaaagattggatcaagataaatttgcagcatggaccagacatgcacgtttcggttatgacacccaactgccc atttacctcccactgggccgtggtaaaatcatacaaggtctgaatgacgcccttgtgggtatgtgcataggggagaaaag gaagattacggtaccatcacacctagcttacggaaaggagggatacaaagtgggcaattttgtagtacctcctgacacca cactagttttcgaggcagagctcgtgttgtttcacgaagagcgcgccatacacgaagcctttaccaagcttgacgccgat aagaattatcttcttgacagagaagagatacgaattttacaggagagttttcagaagatctcagaagagccacatgatcg tctggagaaaaggttcacggagatgttcactcaggcggacaaaaacgaagattccctcatctcattagaggaatttttaa ttgtttctcagcttcaagatccgccaaaatcaacaggcgttgcgcgggataaagcggagctagaaattggagaagtaagc gagcaagctgggccaaagcaggataaagaggaaccggaaattgcaaaagaatttggacaggttggatcaatgcaggataa agcggaaccggaaattgcaaaagaattcgggcaggttggatcaatgcaggataaagcggaaccagaaacggagaaagaaa gcgaggaggatagaacggaaaggaatattccggagaaggaagaattataa |
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Protein
| Protein ID | pfu_aug2.0_1075.1_18072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1075.1_18072.t1 MIWTNVCIVLLSSALFAQGFANPDLDPNLKIEVTRKAHDCKKVTRESVILASSRMEQRLDQDKFAAWTRHARFGYDTQLP IYLPLGRGKIIQGLNDALVGMCIGEKRKITVPSHLAYGKEGYKVGNFVVPPDTTLVFEAELVLFHEERAIHEAFTKLDAD KNYLLDREEIRILQESFQKISEEPHDRLEKRFTEMFTQADKNEDSLISLEEFLIVSQLQDPPKSTGVARDKAELEIGEVS EQAGPKQDKEEPEIAKEFGQVGSMQDKAEPEIAKEFGQVGSMQDKAEPETEKESEEDRTERNIPEKEEL |
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