Gene
| Gene Model ID | pfu_aug2.0_108.1_26850 |
|---|---|
| Locus | scaffold108.1 : 88982 ... 110655 : - |
| To GenomeBrowser | scaffold108.1:88982..110655 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug1.0_18966.1_11173 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26850.t1 | 2 | 1 | Claudin_2 | 4 | 103 | 1.2e-09 | 38.1 | 4.8e-13 | 1.2e-09 | 38.1 |
| pfu_aug2.0_108.1_26850.t1 | 2 | 2 | Claudin_2 | 359 | 390 | 1.2e-09 | 38.1 | 3.1 | 7700.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26850.t1 | gi|524888898|ref|XP_005101013.1| | PREDICTED: voltage-dependent calcium channel gamma-7 subunit-like [Aplysia californica] | 3.0e-35 |
| pfu_aug2.0_108.1_26850.t1 | gi|676489816|ref|XP_009065063.1| | hypothetical protein LOTGIDRAFT_155237 [Lottia gigantea] | 6.0e-34 |
| pfu_aug2.0_108.1_26850.t1 | gi|675892132|ref|XP_009031568.1| | hypothetical protein HELRODRAFT_166386 [Helobdella robusta] | 3.0e-25 |
| pfu_aug2.0_108.1_26850.t1 | gi|524871096|ref|XP_005092324.1| | PREDICTED: voltage-dependent calcium channel gamma-5 subunit-like [Aplysia californica] | 2.0e-21 |
| pfu_aug2.0_108.1_26850.t1 | gi|676489813|ref|XP_009065062.1| | hypothetical protein LOTGIDRAFT_108597 [Lottia gigantea] | 5.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26850.t1 atgtccgtatttttccctgttgcttctctcatgtttatggtgatggcaaccatcttggcaatcataggcaacatcaggga agatgtcaaaacgctactggccgctgtcgcttacatatctggagcattattgctcgcaattggtatcatactgtatatat cagcaatcaacgatgaggtaggacaccggatgaagacgtcggactcaaaggaagttggacctatgaactcgttccgatat tggtacggatggtcgttcttctttgctggcaccgctttcattaccagcatgctcactgctgtagtcctcgtcacacttta cttaaaacggaacaataaacaggaagatatgatcaagattattccaggactagaagatgtcatagattcggattataccc caaaacatggtaaaggtgcatcgtcaagtcattcaaaaagtaaagattccccaaagtcaatcacagactggacagagcaa atggacaggaagttaatggacatacatagggacatgaagcgtgacttcgattccaataactggaagtacgtagcggagag gatgggtacgggacatacgaacgaacaatgccgaatccgagtcaggaggatccaaacctggatgaagactaagaattacc ttgctccggaaactgatttagataaaataagatggacggacagcactggcacagttcacaagatggtgtggatacagaaa tcagagactccgtgccagaggaggaagtgtgtatactgtgtcataaaacgacataagacaaagactggaggcatgatcga gacaaataaaaaatgtcagcagtgtgacaagcccctatgttatggcagattgagggattgttttactcgatatcatgagg agctgtgtacggccgaaaatacttacgaaaaatcagatcgcagaaacgaaaaatcccattgtttaagcgtcggcaaagga aagggaaatgttagtaatgggaaaaactctggaaatatgagtgaaagttttgaaggcagaaatgttaagaaagaaaaagg ggcgtcgtcttcgaaaaggaaaaaatctggaaatattaatgaaaagtcagatagtcgaaatacatacatgaataaaagtg aaggtgaatctatgagctgctcagaaaatattgtgaatgaaaacaatgagatgagtgatgttaatatgtccaaagatgac ggtagttacgagattaacaagcaagaaattgattttcaaaatgagtcggaaagtaaggaagctgggaaatattctgagac aagttgtgagatgaggcctgagataacaagttctgagaaaagtaaatgtgacttaagttctgagaaaagagatgacaata gtatggaggccgagataagcaatcctgagatgatgaatactgaggtgaattatgagaaaagagacgagattgattcacag actgaaatgagacattttgagataacaaatagtgagatgaattcagagaagagaaatgagattagttcagaggccgagtc tcagaaaagacattcccagacgagaaaaagtgaaatagatacagagaaaagagatgagattagctcagagactgagatga gaccttttgagacaacaaatagtgagatggattcagagaagagaaatgagataagttcagaggctgagataagaagttca gagattaggaaaagtgagatggactctcagaaaagagaggagaatacttcagggactgagataagagactcagaagtgag aaataccgatatgaattctgagaagagagacgagataagttcaaaagctgagacaagaaattctgagatgggaaataatg atatgaattcagagaagagagacgagattagttcagagtctgaaataggaaattccgtggtttggaatagtgagataatt tccgagatgagcaatactgatatgaattcagatgatcttaattctgaggctgaatctcaaaatcaaaggtgtgaaaatgt gattgatgccagaataactgaaaatgaaactaactcagttaaggaaaatctcagaaaagacaaatgccggcaaagcccag tcacactgcgcttcaaggcttaa |
|
Protein
| Protein ID | pfu_aug2.0_108.1_26850.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26850.t1 MSVFFPVASLMFMVMATILAIIGNIREDVKTLLAAVAYISGALLLAIGIILYISAINDEVGHRMKTSDSKEVGPMNSFRY WYGWSFFFAGTAFITSMLTAVVLVTLYLKRNNKQEDMIKIIPGLEDVIDSDYTPKHGKGASSSHSKSKDSPKSITDWTEQ MDRKLMDIHRDMKRDFDSNNWKYVAERMGTGHTNEQCRIRVRRIQTWMKTKNYLAPETDLDKIRWTDSTGTVHKMVWIQK SETPCQRRKCVYCVIKRHKTKTGGMIETNKKCQQCDKPLCYGRLRDCFTRYHEELCTAENTYEKSDRRNEKSHCLSVGKG KGNVSNGKNSGNMSESFEGRNVKKEKGASSSKRKKSGNINEKSDSRNTYMNKSEGESMSCSENIVNENNEMSDVNMSKDD GSYEINKQEIDFQNESESKEAGKYSETSCEMRPEITSSEKSKCDLSSEKRDDNSMEAEISNPEMMNTEVNYEKRDEIDSQ TEMRHFEITNSEMNSEKRNEISSEAESQKRHSQTRKSEIDTEKRDEISSETEMRPFETTNSEMDSEKRNEISSEAEIRSS EIRKSEMDSQKREENTSGTEIRDSEVRNTDMNSEKRDEISSKAETRNSEMGNNDMNSEKRDEISSESEIGNSVVWNSEII SEMSNTDMNSDDLNSEAESQNQRCENVIDARITENETNSVKENLRKDKCRQSPVTLRFKA |
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