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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_108.1_26851
Locus scaffold108.1 : 137874 ... 149073 : -
To GenomeBrowser scaffold108.1:137874..149073
Genes list of scaffold scaffold108.1
Synonym pfu_aug1.0_2915.1_15984

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_108.1_26851.t1 2 1 FXa_inhibition 51 60 1.8e-10 40.7 0.75 1900.0 -0.9
pfu_aug2.0_108.1_26851.t1 1 1 EGF_CA 62 101 1.0e-05 25.4 1.4e-08 3.4e-05 23.7
pfu_aug2.0_108.1_26851.t1 2 2 FXa_inhibition 66 101 1.8e-10 40.7 7.2e-14 1.8e-10 40.7
pfu_aug2.0_108.1_26851.t1 2 1 CUB 105 213 0.0 214.4 2.6e-38 6.5e-35 119.5
pfu_aug2.0_108.1_26851.t1 2 2 CUB 218 331 0.0 214.4 1.8e-30 4.5e-27 94.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_108.1_26851.t1 gi|676488081|ref|XP_009064504.1| hypothetical protein LOTGIDRAFT_236092 [Lottia gigantea] 0.0
pfu_aug2.0_108.1_26851.t1 gi|241148275|ref|XP_002405730.1| conserved hypothetical protein [Ixodes scapularis] 0.0
pfu_aug2.0_108.1_26851.t1 gi|524877062|ref|XP_005095238.1| PREDICTED: bone morphogenetic protein 1-like [Aplysia californica] 0.0
pfu_aug2.0_108.1_26851.t1 gi|641674683|ref|XP_008186773.1| PREDICTED: tolloid-like protein 1 [Acyrthosiphon pisum] 0.0
pfu_aug2.0_108.1_26851.t1 gi|242023390|ref|XP_002432117.1| conserved hypothetical protein [Pediculus humanus corporis] 0.0

Transcript
Transcript IDpfu_aug2.0_108.1_26851.t1
Definition-
>pfu_aug2.0_108.1_26851.t1
atgaaactaaggacagtttcagggctcctttgtacactaatcctggcattgctccttaactgcatgagctgtcaatccgt
aacagcgggcatagaaacaatatgcgattataaaaagaggatggagaattacatagaaaacctacatggatgtgttgctg
ataaacatggatgttcgcagagggataaggatgaatgtgcagtatataatggtggatgtcaacatatatgtaagaacact
gtaggtatctatgaatgtgcctgtcatgatggatttacactgcatgaaaacaaacatgactgcaaagaaggttgccaaca
caagatcgaggaccctgatggtgagattagcagtccaaactggccagatttctacccaagtcataaggactgctcgtggc
agttcacaaccacccctggtcatcgtgttaaactgacctttatgacatttgaacttgagccacaaccggagtgtacctac
gaccatattgaagtatttgatggcaatgataaaagctcacgtagcttgggaaagtattgtgggagcaagctaccacctcc
tttgggatctacaagtaatcagatgtatatggtatttcaatccgacgctacagtccataggaaaggatttaatgcaacac
acacatcattatgtggagggcgtttgcttgcctcacacacatcccagtacctttactcccacgccaagtacgatgaacta
aactacgacaataacatggaatgtaaatggaggatagctgcaaaggaaggaaagcgcgtcaaattctactttatctcttt
tgaaatagaagatgatacttactgccgctacgaccatgttgacatttttgatggaggaaatgacacaatcaacaaagtgg
atagatattgtggaagcaagttacctggagaaataatttcaacaagtggtttgctgttggttagatttaaatcagatgac
actatcaattggaaaggtttctcagcagtgtacgtagagacatatcctggtaatataggtaggaccaaacctacaacatg
a

Protein
Protein IDpfu_aug2.0_108.1_26851.t1
Definition-
>pfu_aug2.0_108.1_26851.t1
MKLRTVSGLLCTLILALLLNCMSCQSVTAGIETICDYKKRMENYIENLHGCVADKHGCSQRDKDECAVYNGGCQHICKNT
VGIYECACHDGFTLHENKHDCKEGCQHKIEDPDGEISSPNWPDFYPSHKDCSWQFTTTPGHRVKLTFMTFELEPQPECTY
DHIEVFDGNDKSSRSLGKYCGSKLPPPLGSTSNQMYMVFQSDATVHRKGFNATHTSLCGGRLLASHTSQYLYSHAKYDEL
NYDNNMECKWRIAAKEGKRVKFYFISFEIEDDTYCRYDHVDIFDGGNDTINKVDRYCGSKLPGEIISTSGLLLVRFKSDD
TINWKGFSAVYVETYPGNIGRTKPTT

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