Gene
| Gene Model ID | pfu_aug2.0_108.1_26854 |
|---|---|
| Locus | scaffold108.1 : 208687 ... 214153 : - |
| To GenomeBrowser | scaffold108.1:208687..214153 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug1.0_1306.1_22530 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26854.t1 | 4 | 1 | EF-hand_1 | 15 | 41 | 1.4e-24 | 83.4 | 1.5e-07 | 0.00023 | 20.2 |
| pfu_aug2.0_108.1_26854.t1 | 2 | 1 | EF-hand_7 | 15 | 71 | 3.5e-21 | 75.0 | 6.9e-09 | 1.0e-05 | 25.5 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 1 | EF-hand_6 | 15 | 40 | 7.7e-20 | 68.9 | 7.7e-08 | 0.00011 | 21.7 |
| pfu_aug2.0_108.1_26854.t1 | 3 | 1 | EF-hand_5 | 16 | 37 | 1.5e-11 | 43.1 | 7.8e-07 | 0.0012 | 18.1 |
| pfu_aug2.0_108.1_26854.t1 | 2 | 1 | EF-hand_9 | 17 | 69 | 1.7e-14 | 53.4 | 8.9e-08 | 0.00013 | 21.7 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 1 | EF-hand_8 | 18 | 34 | 2.1e-14 | 52.8 | 0.0044 | 6.5 | 6.4 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 2 | EF-hand_1 | 50 | 75 | 1.4e-24 | 83.4 | 0.0052 | 7.7 | 6.0 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 2 | EF-hand_6 | 52 | 75 | 7.7e-20 | 68.9 | 0.0042 | 6.3 | 6.9 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 2 | EF-hand_8 | 55 | 76 | 2.1e-14 | 52.8 | 0.35 | 520.0 | 0.3 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 3 | EF-hand_8 | 62 | 102 | 2.1e-14 | 52.8 | 0.0081 | 12.0 | 5.6 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 3 | EF-hand_1 | 86 | 114 | 1.4e-24 | 83.4 | 4.3e-08 | 6.3e-05 | 21.9 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 3 | EF-hand_6 | 86 | 115 | 7.7e-20 | 68.9 | 1.3e-08 | 2.0e-05 | 24.1 |
| pfu_aug2.0_108.1_26854.t1 | 2 | 2 | EF-hand_7 | 87 | 147 | 3.5e-21 | 75.0 | 1.7e-17 | 2.5e-14 | 53.1 |
| pfu_aug2.0_108.1_26854.t1 | 3 | 2 | EF-hand_5 | 87 | 102 | 1.5e-11 | 43.1 | 0.057 | 85.0 | 2.7 |
| pfu_aug2.0_108.1_26854.t1 | 2 | 2 | EF-hand_9 | 90 | 148 | 1.7e-14 | 53.4 | 2.6e-10 | 3.8e-07 | 29.9 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 4 | EF-hand_8 | 99 | 148 | 2.1e-14 | 52.8 | 1.2e-14 | 1.8e-11 | 43.4 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 4 | EF-hand_1 | 122 | 149 | 1.4e-24 | 83.4 | 5.2e-12 | 7.8e-09 | 34.2 |
| pfu_aug2.0_108.1_26854.t1 | 4 | 4 | EF-hand_6 | 131 | 148 | 7.7e-20 | 68.9 | 8.3e-06 | 0.012 | 15.3 |
| pfu_aug2.0_108.1_26854.t1 | 3 | 3 | EF-hand_5 | 131 | 147 | 1.5e-11 | 43.1 | 3.3e-07 | 0.00049 | 19.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26854.t1 | gi|676488073|ref|XP_009064501.1| | hypothetical protein LOTGIDRAFT_204683 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_108.1_26854.t1 | gi|684388634|ref|XP_009169125.1| | hypothetical protein T265_13848, partial [Opisthorchis viverrini] | 4.99983e-42 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26854.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26854.t1 atgtcggaatttaaagtatcggaaaaacaatttgcagatgcccatcagacgtttaacctgtttgacaagaagggtacagg ccaagtgtccactaaagagttagaaaaagtttttaaaagtttagcacttcaagttgacgatgagaaactcaaagaatgga gtgacgagcttgatgaagaggctaccggatatttcacatgggatcaatttaagatcctttttgagaggaagttgaaaacg gacgaagatgagagagaattacgggaagcattcagagtgttagacaagggaaataaaggcacaattccagtagaggactt aaggtggattttaaaatcgttaggtgatgatttaacagacgaagaactcgatgaaatgatagcggagacagacacagacg gctcagggacagtagattatgaagaattcaaaacgctgatgacgtcagactga |
|
Protein
| Protein ID | pfu_aug2.0_108.1_26854.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26854.t1 MSEFKVSEKQFADAHQTFNLFDKKGTGQVSTKELEKVFKSLALQVDDEKLKEWSDELDEEATGYFTWDQFKILFERKLKT DEDERELREAFRVLDKGNKGTIPVEDLRWILKSLGDDLTDEELDEMIAETDTDGSGTVDYEEFKTLMTSD |
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