Gene
| Gene Model ID | pfu_aug2.0_108.1_26856 |
|---|---|
| Locus | scaffold108.1 : 224284 ... 230667 : + |
| To GenomeBrowser | scaffold108.1:224284..230667 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug1.0_1306.1_22531 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26856.t1 | 2 | 1 | EF-hand_4 | 15 | 78 | 2.1e-07 | 30.6 | 1.2e-05 | 0.01 | 15.5 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 1 | EF-hand_1 | 17 | 45 | 2.8e-36 | 120.0 | 1.1e-11 | 9.4e-09 | 33.9 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 1 | EF-hand_6 | 17 | 46 | 4.3e-27 | 91.5 | 4.2e-12 | 3.7e-09 | 35.7 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 1 | EF-hand_8 | 18 | 37 | 3.7e-28 | 96.8 | 0.00052 | 0.45 | 10.1 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 1 | EF-hand_7 | 19 | 78 | 1.8e-33 | 114.4 | 2.9e-17 | 2.5e-14 | 53.1 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 1 | EF-hand_5 | 19 | 38 | 4.8e-24 | 82.5 | 8.2e-09 | 7.1e-06 | 25.1 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 1 | EF-hand_9 | 21 | 80 | 7.4e-12 | 45.0 | 5.2e-11 | 4.5e-08 | 32.8 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 1 | SPARC_Ca_bdg | 21 | 75 | 3.2e-06 | 27.1 | 2.5e-05 | 0.022 | 14.8 |
| pfu_aug2.0_108.1_26856.t1 | 3 | 1 | UPF0154 | 33 | 62 | 8.5e-06 | 25.3 | 0.00049 | 0.42 | 10.2 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 2 | EF-hand_8 | 38 | 80 | 3.7e-28 | 96.8 | 2.4e-13 | 2.1e-10 | 40.0 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 2 | EF-hand_1 | 53 | 80 | 2.8e-36 | 120.0 | 2.6e-12 | 2.3e-09 | 35.9 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 2 | EF-hand_6 | 54 | 79 | 4.3e-27 | 91.5 | 1.0e-06 | 0.00091 | 18.9 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 2 | EF-hand_5 | 54 | 75 | 4.8e-24 | 82.5 | 7.6e-08 | 6.7e-05 | 22.0 |
| pfu_aug2.0_108.1_26856.t1 | 3 | 2 | UPF0154 | 73 | 97 | 8.5e-06 | 25.3 | 0.59 | 510.0 | 0.3 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 3 | EF-hand_8 | 87 | 110 | 3.7e-28 | 96.8 | 1.1e-05 | 0.0093 | 15.5 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 2 | SPARC_Ca_bdg | 87 | 143 | 3.2e-06 | 27.1 | 0.00049 | 0.43 | 10.6 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 3 | EF-hand_1 | 90 | 118 | 2.8e-36 | 120.0 | 7.1e-13 | 6.2e-10 | 37.6 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 3 | EF-hand_6 | 90 | 119 | 4.3e-27 | 91.5 | 2.2e-12 | 1.9e-09 | 36.5 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 2 | EF-hand_7 | 91 | 145 | 1.8e-33 | 114.4 | 2.3e-20 | 2.0e-17 | 63.0 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 3 | EF-hand_5 | 91 | 115 | 4.8e-24 | 82.5 | 3.1e-10 | 2.7e-07 | 29.6 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 2 | EF-hand_9 | 94 | 144 | 7.4e-12 | 45.0 | 0.00058 | 0.51 | 10.2 |
| pfu_aug2.0_108.1_26856.t1 | 2 | 2 | EF-hand_4 | 97 | 149 | 2.1e-07 | 30.6 | 0.00018 | 0.16 | 11.7 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 4 | EF-hand_8 | 103 | 145 | 3.7e-28 | 96.8 | 1.7e-15 | 1.5e-12 | 46.9 |
| pfu_aug2.0_108.1_26856.t1 | 3 | 3 | UPF0154 | 106 | 134 | 8.5e-06 | 25.3 | 0.00036 | 0.31 | 10.6 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 4 | EF-hand_1 | 126 | 145 | 2.8e-36 | 120.0 | 5.0e-07 | 0.00044 | 19.3 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 4 | EF-hand_5 | 130 | 143 | 4.8e-24 | 82.5 | 0.0012 | 1.1 | 8.7 |
| pfu_aug2.0_108.1_26856.t1 | 4 | 4 | EF-hand_6 | 132 | 144 | 4.3e-27 | 91.5 | 0.16 | 140.0 | 2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26856.t1 | gi|683890711|ref|XP_009089583.1| | PREDICTED: calmodulin isoform X1 [Serinus canaria] | 0.0 |
| pfu_aug2.0_108.1_26856.t1 | gi|488510629|ref|XP_004447400.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26856.t1 atgatgaactcggagcaggtgatcacactgacagatgaacaaatcgcagagtttaaggaggcgttttcattatttgataa agatggagacgggacgatcacaaccagtgaactcgggatcgtaatgagatcactgggacagaacccaacagaggcggagc tacaagacatgatcaatgaggtggacgctgatggtaatggaacaatcgatttcgaggagtttctattgatgatggctcga aaaatgaaggatacggacagtgaagaggaattacgagaagctttccgagtgttcgataaagacggaaatggatttataag tgctgctgaactcagacatgtcatgacaaatttgggagaaaaattaacagatgaagaagtagatgagatgatcaaagaag ctgatttagatggggacggaatggtcaattatgaaggtacattacttttggtaccaatcgaacactcactgcatgctggt tcagaaaacaaatctatcaaagattttagagagaacgaaaataacataatgataggattagtattttag |
|
Protein
| Protein ID | pfu_aug2.0_108.1_26856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26856.t1 MMNSEQVITLTDEQIAEFKEAFSLFDKDGDGTITTSELGIVMRSLGQNPTEAELQDMINEVDADGNGTIDFEEFLLMMAR KMKDTDSEEELREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADLDGDGMVNYEGTLLLVPIEHSLHAG SENKSIKDFRENENNIMIGLVF |
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