Gene
| Gene Model ID | pfu_aug2.0_108.1_26857 |
|---|---|
| Locus | scaffold108.1 : 239364 ... 248593 : - |
| To GenomeBrowser | scaffold108.1:239364..248593 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26857.t1 | 1 | 1 | 7TM_GPCR_Srsx | 50 | 338 | 3.5e-09 | 36.1 | 2.6e-12 | 6.3e-09 | 35.3 |
| pfu_aug2.0_108.1_26857.t1 | 1 | 1 | 7tm_1 | 54 | 323 | 0.0 | 193.7 | 0.0 | 0.0 | 193.3 |
| pfu_aug2.0_108.1_26857.t1 | 1 | 1 | 7TM_GPCR_Srw | 56 | 340 | 2.3e-08 | 33.5 | 1.7e-11 | 4.2e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26857.t1 | gi|676479998|ref|XP_009061922.1| | hypothetical protein LOTGIDRAFT_127828 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_108.1_26857.t1 | gi|261289481|ref|XP_002604717.1| | hypothetical protein BRAFLDRAFT_222430 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26857.t1 atggtcaatagcagctgtactcccggtgaggaagttaatcttgtgttaagtccagctttcaccagtctgtttgactctcc caaagttccagagattcctatgtgggaggccgtcatcaaaatcgtctgctatataatagctttcttaatggacgttatag gaaatacgttagtagtaagcatcatctgctgtaacaagaagatgcgaacctccaccaacattttgatactgaacctggct gtatctgacctcttggtggcactgttctgcatgtgggtacatctaggaaatgacatatacatagactggccgttcggacc attcatgtgtaaattttcatatttcatacaagagatagcattagcatccagtgttttaacccttactactatatcaatag agcgttctcttgccattctaatgccacttaaaggtaaaatgtccgtcctgtccatcagcggctgtatatgtctgaactgg acactgtccgtggcagtagccgcaccttatctggtgtacaaagaacagcttgaggtccaatggagggacaggaaacaagt atggtgtgacgaaacttggccaaaactttatatggacagtaaatgtactatcggacagccggggaaaaagatatactata tagtacaatgtatcgtgatgtacttcataccgattataataatgatagtgacttattgtatcattactataacactattg aataggagagtaccaggagaaattatggaatcaatcagggcagctcaggaaaaaaccaggagaaaggtaaacagaatgct ggtgatcatacttgcagtatttattatatgctggactccacaacaagcgcttgttctatgggcagctgttaagaagaccg gggaaaagaagcctgaatttatcgagcatctccggtatgccacgttgtatattgctttcttcaatagctctataaacccc gttttatatggaggtctgaatgagaatttcaggaaaggttttaaggaagcattcaaatgtttgatatggagaaagagaaa tcaaatatatccagacggtctaacagacaacacgagaaggactcgtgacaggcagggcacgaagcaaagcaacctaccac ccctaaagaaccaagaacgtgtccctccagcctctgtcagcaggaatcgatcttctgacccagacagggtcgctgtatcc acaagtaaacaaagctttgataaggttcacctacccccagtacccggagtcaggaccagtcagcaattatcagccaacaa ttcggtggttaccatgtcgatcaaacccaataacgatcaaatccaataa |
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Protein
| Protein ID | pfu_aug2.0_108.1_26857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26857.t1 MVNSSCTPGEEVNLVLSPAFTSLFDSPKVPEIPMWEAVIKIVCYIIAFLMDVIGNTLVVSIICCNKKMRTSTNILILNLA VSDLLVALFCMWVHLGNDIYIDWPFGPFMCKFSYFIQEIALASSVLTLTTISIERSLAILMPLKGKMSVLSISGCICLNW TLSVAVAAPYLVYKEQLEVQWRDRKQVWCDETWPKLYMDSKCTIGQPGKKIYYIVQCIVMYFIPIIIMIVTYCIITITLL NRRVPGEIMESIRAAQEKTRRKVNRMLVIILAVFIICWTPQQALVLWAAVKKTGEKKPEFIEHLRYATLYIAFFNSSINP VLYGGLNENFRKGFKEAFKCLIWRKRNQIYPDGLTDNTRRTRDRQGTKQSNLPPLKNQERVPPASVSRNRSSDPDRVAVS TSKQSFDKVHLPPVPGVRTSQQLSANNSVVTMSIKPNNDQIQ |
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