Gene
| Gene Model ID | pfu_aug2.0_108.1_26861 |
|---|---|
| Locus | scaffold108.1 : 271919 ... 287273 : - |
| To GenomeBrowser | scaffold108.1:271919..287273 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26861.t2 | 1 | 1 | Herpes_gE | 204 | 288 | 7.3e-06 | 24.5 | 2.4e-09 | 1.2e-05 | 23.7 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26861.t1 atggttgtcatctgcacacaggtgaaatttttacacacctgcattttttaccttggcgttacacttgtttacggaggata tgttttccaagagcgccctcagaagtatgactggtttacagcaaacaggatatgtgacctgccgggcacaagggagctgt gcaagggtggggtctgtaacgctacaagactgaggaatctactggccccgggaacatcagagaatataacgacatgggtc aggatacattataaaatcaacgaaacaagtcaaatgagaacaggatgttatctgtatgatacggattacaacaaagtaaa gcccgttggtgtgtatataaagaataactcaccagaaaagtgttccaacgtgtgtggatttggaagtcaagttttctatt tgctggtaggatattctctaggaatatcagatccaaatagtgaatccacaatcaagaagaaatccccatactgtgtttat gcatcgaccacgaggaatagattcgaaataggaaggaattgtatgcagaacaggacatgcttgaaaaagataaatgcatc acgtttgagtgttgaggacgagtctcttttgaccaccattgctgtaagagggacaacagcaaactcacaatatgaaacag aacagggaggcagtacaccattgcttcagacatccacttatggcttgagaaagcttcacaattcaacaaacatggtcagc ggtgcacagatgtcagaggatagtcaacttggaatatatgtcggtgcagctatggcgttcatctgcgtattatgtgcaat tgttatcattatattagccatcaagaaaagaaaacgaaagtctagccgatcagagattaacacagtatatcggagtgtcc caaatgacgagcaaaacgttagtttactaccagcacagacatcaagtacagatcgacaaacaagacctcagagaaacgta ccggacacaacaacatcacagaatgaaaacgacggacattacgatcatctggacagaaccggacagcatcaaccnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaa gaaaccgccagcaatgacaacacgtatgatcacgctgaggctgactcacaggaagttacgtatggctactcacggacaga ccggaaccaaacatcaaggtcattagatggtgatgatatatatgatcatactaatgatgacatttacaatgaaactagaa aagttacaaatgaagatagtgatgatcagaattatgattatgaagttactgataaaaataaatgtgaaaaattagtgacc gaatcaagtgaacttatgaaggacaaaggaagagacgatcataagattactagtagttcatga |
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| Transcript ID | pfu_aug2.0_108.1_26861.t2 |
| Definition | - |
>pfu_aug2.0_108.1_26861.t2 atggttgtcatctgcacacaggtgaaatttttacacacctgcattttttaccttggcgttacacttgtttacggaggata tgttttccaagagcgccctcagaagtatgactggtttacagcaaacaggatatgtgacctgccgggcacaagggagctgt gcaagggtggggtctgtaacgctacaagactgaggaatctactggccccgggaacatcagagaatataacgacatgggtc aggatacattataaaatcaacgaaacaagtcaaatgagaacaggatgttatctgtatgatacggattacaacaaagtaaa gcccgttggtgtgtatataaagaataactcaccagaaaagtgttccaacgtgtgtggatttggaagtcaagttttctatt tgctggtaggatattctctaggaatatcagatccaaatagtgaatccacaatcaagaagaaatccccatactgtgtttat gcatcgaccacgaggaatagattcgaaataggaaggaattgtatgcagaacaggacatgcttgaaaaagataaatgcatc acgtttgagtgttgaggacgagtctcttttgaccaccattgctgtaagagggacaacagcaaactcacaatatgaaacag aacagggaggcagtacaccattatatgtcggtgcagctatggcgttcatctgcgtattatgtgcaattgttatcattata ttagccatcaagaaaagaaaacgaaagtctagccgatcagagattaacacagtatatcggagtgtcccaaatgacgagca aaacgttagtttactaccagcacagacatcaagtacagatcgacaaacaagacctcagagaaacgtaccggacacaacaa catcacagaatgaaaacgacggacattacgatcatctggacagaaccggacagcatcaaccnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaaccgccagca atgacaacacgtatgatcacgctgaggctgactcacaggaagttacgtatggctactcacggacagaccggaaccaaaca tcaaggtcattagatggtgatgatatatatgatcatactaatgatgacatttacaatgaaactagaaaagttacaaatga agatagtgatgatcagaattatgattatgaagttactgataaaaataaatgtgaaaaattagtgaccgaatcaagtgaac ttatgaaggacaaaggaagagacgatcataagattactagtagttcatga |
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Protein
| Protein ID | pfu_aug2.0_108.1_26861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26861.t1 MVVICTQVKFLHTCIFYLGVTLVYGGYVFQERPQKYDWFTANRICDLPGTRELCKGGVCNATRLRNLLAPGTSENITTWV RIHYKINETSQMRTGCYLYDTDYNKVKPVGVYIKNNSPEKCSNVCGFGSQVFYLLVGYSLGISDPNSESTIKKKSPYCVY ASTTRNRFEIGRNCMQNRTCLKKINASRLSVEDESLLTTIAVRGTTANSQYETEQGGSTPLLQTSTYGLRKLHNSTNMVS GAQMSEDSQLGIYVGAAMAFICVLCAIVIIILAIKKRKRKSSRSEINTVYRSVPNDEQNVSLLPAQTSSTDRQTRPQRNV PDTTTSQNENDGHYDHLDRTGQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK ETASNDNTYDHAEADSQEVTYGYSRTDRNQTSRSLDGDDIYDHTNDDIYNETRKVTNEDSDDQNYDYEVTDKNKCEKLVT ESSELMKDKGRDDHKITSSS |
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| Protein ID | pfu_aug2.0_108.1_26861.t2 |
| Definition | - |
>pfu_aug2.0_108.1_26861.t2 MVVICTQVKFLHTCIFYLGVTLVYGGYVFQERPQKYDWFTANRICDLPGTRELCKGGVCNATRLRNLLAPGTSENITTWV RIHYKINETSQMRTGCYLYDTDYNKVKPVGVYIKNNSPEKCSNVCGFGSQVFYLLVGYSLGISDPNSESTIKKKSPYCVY ASTTRNRFEIGRNCMQNRTCLKKINASRLSVEDESLLTTIAVRGTTANSQYETEQGGSTPLYVGAAMAFICVLCAIVIII LAIKKRKRKSSRSEINTVYRSVPNDEQNVSLLPAQTSSTDRQTRPQRNVPDTTTSQNENDGHYDHLDRTGQHQXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETASNDNTYDHAEADSQEVTYGYSRTDRNQT SRSLDGDDIYDHTNDDIYNETRKVTNEDSDDQNYDYEVTDKNKCEKLVTESSELMKDKGRDDHKITSSS |
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