Gene
| Gene Model ID | pfu_aug2.0_108.1_26863 |
|---|---|
| Locus | scaffold108.1 : 328513 ... 341407 : + |
| To GenomeBrowser | scaffold108.1:328513..341407 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug1.0_4138.1_16303 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26863.t1 | 1 | 1 | Lectin_C | 53 | 165 | 3.8e-16 | 59.6 | 4.0e-19 | 8.4e-16 | 58.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26863.t1 | gi|617384760|ref|XP_007547607.1| | PREDICTED: lactose-binding lectin l-2-like [Poecilia formosa] | 8.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26863.t1 atggttaacgagatgggctcttcagacctcctgcttattgttttatcttgtgtattacacttcactgtaaatgcagatga atgcttagaacgtacaaaaaggcttgggggataccaagcaactttcaatggtagatgttacaagtttgtcacaagtgaag aaacatggataaaggccaacagaaactgcaagtcatggggaggaaacctggtatctataccagacaaagctaccatggac ttcctccggagaaccctgagtcagcgtggatggtcaaataatggtgtgtggattggagcccatgctcgtggtggtggagg gtggaggtggactacaggtgaagcgatgactttccaatattgggcttctggtcagcccagcaccacgggtggtatatcgt ttgaggactgtggacagatgagacgttcagacggatggagatggcatgattatcattgtaatttcttcctgtatacgtac agatatatctgtcagtttgacacaagaaaaggtggtgatgtggaggggtccctggccaatacagatagcagatcaaatca ctcagacaaagataccggtatagttgtgggatttgtgatcggagggattttactggtggccatctttgtccttgccacta tctttttacgcaggaggagaaggaaacctttctatgaagccaacgtgaggttctctaacctgagttacatgcacgtaaac agacagagtcctgatcacgctgcacctaatgtttatgtagatgccaatgagatgaacaagctgtatgaggaggtcaacaa actgaccaatcatggcgtgaattataatgaggtgggtggagctacaagtggtgaggcaggggccgtaggtgaaccgattt atgatgttcctgatgacataaccagctgcaaagcagagaatatcaaactgaataatgctattggagagaaaagtacggga gtttctattgcaaagcttggtcctaaaaagatgaacagtgagatggaagagaagcgagttgtagaccctgataaaccctg caatctacgatgtcagcaaagtatgtatgtaaacacagatagccatgctacatcagtggcacatgataacatcacaccaa cagccgatagtaacgctacaccaggggctagtaataatgctacgatcgagtctgatgggggttacgaggagcctgtatca gcttcctctctacaggctcctcccagcgaacaaacggacattaaacaagaacacctctatgatgaagtcaactag |
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Protein
| Protein ID | pfu_aug2.0_108.1_26863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26863.t1 MVNEMGSSDLLLIVLSCVLHFTVNADECLERTKRLGGYQATFNGRCYKFVTSEETWIKANRNCKSWGGNLVSIPDKATMD FLRRTLSQRGWSNNGVWIGAHARGGGGWRWTTGEAMTFQYWASGQPSTTGGISFEDCGQMRRSDGWRWHDYHCNFFLYTY RYICQFDTRKGGDVEGSLANTDSRSNHSDKDTGIVVGFVIGGILLVAIFVLATIFLRRRRRKPFYEANVRFSNLSYMHVN RQSPDHAAPNVYVDANEMNKLYEEVNKLTNHGVNYNEVGGATSGEAGAVGEPIYDVPDDITSCKAENIKLNNAIGEKSTG VSIAKLGPKKMNSEMEEKRVVDPDKPCNLRCQQSMYVNTDSHATSVAHDNITPTADSNATPGASNNATIESDGGYEEPVS ASSLQAPPSEQTDIKQEHLYDEVN |
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