Gene
| Gene Model ID | pfu_aug2.0_108.1_26867 |
|---|---|
| Locus | scaffold108.1 : 431913 ... 439011 : + |
| To GenomeBrowser | scaffold108.1:431913..439011 |
| Genes list of scaffold | scaffold108.1 |
| Synonym | pfu_aug1.0_4988.1_67120 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_108.1_26867.t1 | 1 | 1 | CDC27 | 1 | 399 | 0.0 | 194.0 | 0.0 | 0.0 | 193.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_108.1_26867.t1 | gi|676453120|ref|XP_009053252.1| | hypothetical protein LOTGIDRAFT_231845 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_108.1_26867.t1 | gi|524915098|ref|XP_005112355.1| | PREDICTED: DNA polymerase delta subunit 3-like [Aplysia californica] | 5.0e-40 |
| pfu_aug2.0_108.1_26867.t1 | gi|555982751|ref|XP_005903281.1| | PREDICTED: DNA polymerase delta subunit 3 [Bos mutus] | 2.0e-39 |
| pfu_aug2.0_108.1_26867.t1 | gi|528978054|ref|XP_005216310.1| | PREDICTED: DNA polymerase delta subunit 3 isoform X3 [Bos taurus] | 3.0e-39 |
| pfu_aug2.0_108.1_26867.t1 | gi|449485608|ref|XP_002187642.2| | PREDICTED: DNA polymerase delta subunit 3 [Taeniopygia guttata] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_108.1_26867.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26867.t1 atgctatatgcctttattcaagaccagaggaataagaaggacaatgatggtttatatgtgacctactttgtagctggcgt gacaaaaccagacagtggaattcagtgccataaatgcagtattgtatcagaggaaaatttgaatccagccaaaagcagct ttgcttcagttactagctgtcacatctacagtgtacagaagtcaaaggtcaaggatccaaatgtactgtactcagctgat tttgatgcagtcaaagataccctctctgatacaaataaatttggtgctattcggcacactggtatcaaagttaggtcgga ggccgaacttagaaggaaacctccaccccagttatctaatgatccaccgttaaacaaggtagatgggagtaaagattcca agattagcaatgctgggacaaataaaccagccccaaagaagggaggcatagcaagcatgttcagtaaacaggcagaaaaa aaatctccggaaaaagtggaaaagtcagagctgaaggaagacaagaagtctcatgacacaaaaacagcaaagaaaggagt tatgaacttctttgccaatcacacaggaaagaaatcagaaccaaaggttgaggaaaagaaggcggagcctgaacctaaaa aggcagagacagtttctccacctaagaatgaaagtaaagccaaaggaactaaaggaaagaagacaagtagaaaagctgaa acagacgatgatgatagaaagaagaaaagacgaagaattgtacaagagtcatctgatagtagcagtgaagaagagatgga atatgagagtcctgtccctagtccagcaagagttccctcccctccccctgagagggaaccttcccctgccccagagtccc ctatacccaaggcagtaccagagaaaaagactgtaaatggaggcagctctaatacaacagaaaaacacagaaaacgacgg aggaaacttgtacctaaaacttttatggatgaagatggctatatggtaacggagaaagtttgggaaagtgagtcaacaga tgcttcagatgaagaacctgtccctcctcccaagaaagcagctcctcaacctcagaaaacctcaccagcgaaaaagaaag cctctcccaagaagaaatcacctccaaactccagcagtagaaaacaaatggcccttacttcattctttactaagaagtga |
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Protein
| Protein ID | pfu_aug2.0_108.1_26867.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_108.1_26867.t1 MLYAFIQDQRNKKDNDGLYVTYFVAGVTKPDSGIQCHKCSIVSEENLNPAKSSFASVTSCHIYSVQKSKVKDPNVLYSAD FDAVKDTLSDTNKFGAIRHTGIKVRSEAELRRKPPPQLSNDPPLNKVDGSKDSKISNAGTNKPAPKKGGIASMFSKQAEK KSPEKVEKSELKEDKKSHDTKTAKKGVMNFFANHTGKKSEPKVEEKKAEPEPKKAETVSPPKNESKAKGTKGKKTSRKAE TDDDDRKKKRRRIVQESSDSSSEEEMEYESPVPSPARVPSPPPEREPSPAPESPIPKAVPEKKTVNGGSSNTTEKHRKRR RKLVPKTFMDEDGYMVTEKVWESESTDASDEEPVPPPKKAAPQPQKTSPAKKKASPKKKSPPNSSSRKQMALTSFFTKK |
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